Matt Gethers/Articles to Read: Difference between revisions

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==Technical 3==
==Technical 3==


[http://www.springerlink.com/content/543770407247j236/ Genetic aspects of floral fragrance in plants]
[[/Technical 3|Technical 3]]
 
[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TCW-4MV719J-2&_user=501045&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000022659&_version=1&_urlVersion=0&_userid=501045&md5=681a4c99cdb693c259ccb2091baedb7a Scent engineering: toward the goal of controlling how flowers smell]
 
[http://pubs.acs.org/doi/pdfplus/10.1021/nl900898t Alternating Current Driven Electroluminescence from ZnSe/ZnS:Mn/ZnS Nanocrystals]
 
[http://pubs.acs.org/doi/full/10.1021/nl9012979 Imaging Surface Charges of Individual Biomolecules]
 
[http://pubs.acs.org/doi/full/10.1021/nl901403u Synthetic Proton-Gated Ion Channels via Single Solid-State Nanochannels Modified with Responsive Polymer Brushes]
 
[http://pubs.acs.org/doi/pdfplus/10.1021/bi9007484 The Charge Conduction Properties of a Parallel-Stranded DNA GQuadruplex: Implications for Chromosomal Oxidative Damage]
 
[http://www.iop.org/EJ/article/-alert=44812/0031-9155/54/13/006/pmb9_13_006.pdf?request-id=804e066c-7438-4e97-9be8-a8905e7f708f Generalized model of the microwave auditory effect]
 
[http://pubs.acs.org/doi/full/10.1021/nl9011886 Ordering of the Nanoscale Step Morphology As a Mechanism for Droplet Self-Propulsion]
 
[http://www.pnas.org/content/106/25/10135.abstract?etoc An externally tunable bacterial band-pass filter]
 
[http://www.pnas.org/content/106/25/10153.abstract?etoc Direct single-molecule observation of a protein living in two opposed native structures]
 
[http://www.iop.org/EJ/article/-alert=44812/0022-3727/42/13/132002/d9_13_132002.pdf?request-id=24cf2a13-c8ce-49fa-89af-b52c718dffd3 Evidence of magnetic vortices formation in Mn-based sub-micrometre structures embedded in Si–Mn films]
 
[http://www.iop.org/EJ/article/-alert=44812/0022-3727/42/13/135501/d9_13_135501.pdf?request-id=b464a7e0-4554-4d1b-84a4-1c29c72c749a Oscillating magnetic field-actuated microvalves for micro- and nanofluidics]
 
[http://pubs.acs.org/stoken/beta/select/abs/10.1021/ja7103125 Intracellular Spatial Control of Fluorescent Magnetic Nanoparticles]
 
[http://pubs.acs.org/doi/full/10.1021/nl901208v Surface Phonon Polaritons Mediated Energy Transfer between Nanoscale Gaps]
 
[http://pubs.acs.org/doi/full/10.1021/nl901535m Rapid and Dynamic Intracellular Patterning of Cell-Internalized Magnetic Fluorescent Nanoparticles]
 
[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WBK-4WGMB42-7&_user=501045&_rdoc=1&_fmt=&_orig=search&_sort=d&_docanchor=&view=c&_acct=C000022659&_version=1&_urlVersion=0&_userid=501045&md5=cfb51abb53ccf9a4dd02d7ecdb323a92 Radiation-induced tetramer-to-dimer transition of Escherichia coli lactose repressor]
 
[http://www.iop.org/EJ/article/-alert=44812/0022-3727/42/14/145109/d9_14_145109.pdf?request-id=d02e2879-d1c7-4fa9-a5ab-b1178f14a908 Current bistability in a weakly coupled multi-quantum well structure: a magnetic field induced ‘memory effect’]
 
[http://www.iop.org/EJ/article/-alert=44812/0022-3727/42/14/145408/d9_14_145408.pdf?request-id=589ec10a-6050-451c-b519-4cbccf7b23df Calculations of the resonant response of carbon nanotubes to binding of DNA]
 
[http://www.pnas.org/content/106/26/10499.abstract?etoc Spiral and target patterns in bivalve nacre manifest a natural excitable medium from layer growth of a biological liquid crystal]
 
[http://www.cnd.mcgill.ca/bios/bub/excitablemain.html Excitable Media]
 
[http://www.pnas.org/content/106/26/10632.abstract?etoc Universal behavior of the osmotically compressed cell and its analogy to the colloidal glass transition]
 
[http://abbs.oxfordjournals.org/cgi/content/abstract/41/7/561?etoc= cDNA microarray reveals the alterations of cytoskeleton-related genes in osteoblast under high magneto-gravitational environment]
 
[http://www.nature.com/nmeth/journal/v6/n7/full/nmeth0709-487.html Will planets reveal the light of their life?]
 
[http://www.nature.com/nmeth/journal/v6/n7/full/nmeth.1336.html Reaching the protein folding speed limit with large, sub-microsecond pressure jumps]
 
[http://www.nature.com/nmeth/journal/v6/n7/full/nmeth0709-490.html Downhill protein folding under pressure]
 
[http://scitation.aip.org/getabs/servlet/GetabsServlet?prog=normal&id=ETNEBJ000004000009000070000001&idtype=cvips&gifs=Yes&type=ALERT Slow down to speed up]
 
[http://www.nature.com/nnano/journal/v4/n7/full/nnano.2009.169.html Nanoelectromechanical systems: Mass spec goes nanomechanical]
 
[http://www.nature.com/nnano/journal/v4/n7/full/nnano.2009.161.html Ferroelectric memory: Slim fast]
 
[http://www.nature.com/nnano/journal/v4/n7/full/nnano.2009.121.html Droplet networks with incorporated protein diodes show collective properties]
 
[http://www.nature.com/nnano/journal/v4/n7/full/nnano.2009.152.html Towards single-molecule nanomechanical mass spectrometry]
 
[http://www.pnas.org/content/106/27/10890.full Locating the transition from periodic oscillations to spatiotemporal chaos in the wake of invasion]
 
[http://www.pnas.org/content/106/27/10999.full Traceless protein splicing utilizing evolved split inteins]
 
[http://www.pnas.org/content/106/27/11183.full Tentacled snakes turn C-starts to their advantage and predict future prey behavior]
 
[http://www.pnas.org/content/106/27/11212.full Programmed loss of millions of base pairs from a vertebrate genome]
 
[http://www.pnas.org/content/106/27/10960.full Mesoscopic atomic entanglement for precision measurements beyond the standard quantum limit]
 
[http://pubs.acs.org/doi/full/10.1021/nl900944y Propulsion of Gold Nanoparticles with Surface Plasmon Polaritons: Evidence of Enhanced Optical Force from Near-Field Coupling between Gold Particle and Gold Film]
 
[http://pubs.acs.org/doi/full/10.1021/bi9007726 Click Chemistry and Bioorthogonal Reactions: Unprecedented Selectivity in the Labeling of Biological Molecules]
 
[http://www.nature.com/nature/journal/v409/n6816/full/409027a0.html Quantum engineering: Squeezing entanglement]
 
[http://www.nature.com/nature/journal/v409/n6816/full/409063a0.html Many-particle entanglement with Bose–Einstein condensates]
 
[http://www.nature.com/nature/journal/v459/n7247/full/459653a.html Quantum mechanics: Entanglement goes mechanical]
 
[http://pubs.acs.org/doi/full/10.1021/nl901554s Thermoelectric Signatures of Coherent Transport in Single-Molecule Heterojunctions]
 
[http://pubs.acs.org/doi/full/10.1021/nl901710n Directed Hybridization and Melting of DNA Linkers using Counterion-Screened Electric Fields]
 
 
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#Chen pmid=19566953
#Cournac pmid=19257878
#Desai pmid=19264798
#Endler pmid=19364720
#Gibson pmid=19363495
#Haseloff pmid=19493895
#Liu pmid=19191955
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#Weber pmid=19190091
</biblio>


==Technical 4==
==Technical 4==

Revision as of 09:53, 15 September 2009

Articles to Read

Potential Grad Work

Favorite Journals

Nature Nanotechnology (Has categories)

Biochemistry

Journal of Biological Engineering

Journal of Chemical Biology

Biotechnology and Bioengineering

Bioelectromagnetics

Physical Biology

NanoLetters

IET Nanobiotechnology

Biophysical Journal

Review of Scientific Instruments

IEEE Sensors Journal

Nanobioscience, IEEE Transactions on

Nanobiotechnology, IET

Nanotechnology, IEEE Transactions on

Technical

Technical 1

Technical 2

Technical 2

Technical 3

Technical 3

Technical 4

Solving a Hamiltonian Path Problem with a bacterial computer

A thermodynamic approach to PCR primer design

Entangled mechanical oscillators

Quantum all the way

Quantum Coherence Insight article

Putting Mechanics into Quantum Mechanics

Deterministic quantum teleportation of atomic qubits

A Decoherence-Free Quantum Memory Using Trapped Ions

Experimental entanglement of four particles

Sequence dependence of the curvature of DNA: a test of the phasing hypothesis

Acoustically driven programmable liquid motion using resonance cavities

Förster resonance energy transfer

A Nanoelectromechanical Single-Atom Switch

Surface plasmon-polaritons, surface plasmon resonance

DNA Strands from Denatured Duplexes are Translocated through Engineered Protein Nanopores at Alkaline pH

Tuning Nanoelectromechanical Resonators with Mass Migration

Micromachined Fabry−Perot Interferometer with Embedded Nanochannels for Nanoscale Fluid Dynamics

Comparison of the Thermodynamics and Basepair Dynamics of a full LNA:DNA duplex and of the isosequential DNA:DNA duplex

Tribology

Plasmas for spacecraft propulsion

Scanning tunnelling microscopy: A DNA sequence scanned

Microwave sources: Spin-torque oscillators get in phase

Damping of acoustic vibrations in gold nanoparticles

Measurement of the quantum capacitance of graphene

Partial sequencing of a single DNA molecule with a scanning tunnelling microscope

[http://www.iop.org/EJ/article/-alert=44812/0031-9155/54/16/011/pmb9_16_011.pdf?request-id=7f8b14b2-be6a-4e27-b3e6-d1fcd07b9aa4 The low-energy ion range in DNA]

Metabolic engineering without plasmids

Triggering Enzymatic Activity with Force (Global enzymatic control mechanism?)

Parametric Nanomechanical Amplification at Very High Frequency

Exciton-Plasmon States in Nanoscale Materials: Breakdown of the Tamm−Dancoff Approximation

Bioelectronic silicon nanowire devices using functional membrane proteins

Biology under construction: in vitro reconstitution of cellular function



  1. Buechner J. Are the Gödel incompleteness theorems limitative results for the neurosciences?. J Biol Phys. 2010 Jan;36(1):23-44. DOI:10.1007/s10867-009-9160-1 | PubMed ID:19669418 | HubMed [Buechner]
  2. Gaisser S, Reiss T, Lunkes A, Müller KM, and Bernauer H. Making the most of synthetic biology. Strategies for synthetic biology development in Europe. EMBO Rep. 2009 Aug;10 Suppl 1(Suppl 1):S5-8. DOI:10.1038/embor.2009.118 | PubMed ID:19636305 | HubMed [Gaisser]
  3. Morange M. A new revolution? The place of systems biology and synthetic biology in the history of biology. EMBO Rep. 2009 Aug;10 Suppl 1(Suppl 1):S50-3. DOI:10.1038/embor.2009.156 | PubMed ID:19636306 | HubMed [Morange]
  4. Schwille P and Diez S. Synthetic biology of minimal systems. Crit Rev Biochem Mol Biol. 2009 Jul-Aug;44(4):223-42. DOI:10.1080/10409230903074549 | PubMed ID:19635039 | HubMed [Schwille]
  5. Stein V and Hollfelder F. An efficient method to assemble linear DNA templates for in vitro screening and selection systems. Nucleic Acids Res. 2009 Oct;37(18):e122. DOI:10.1093/nar/gkp589 | PubMed ID:19617373 | HubMed [Stein]

All Medline abstracts: PubMed | HubMed

Technical 5

Thermal and power characteristics of plasma torch with reverse vortex

Frustrated bistability as a means to engineer oscillations in biological systems

Physical signals for protein–DNA recognition

Engineering of bio-hybrid materials by electrospinning polymer-microbe fibers

Blue Luminescence Based on Quantum Confinement at Peptide Nanotubes

Electrostatically Confined Quantum Rings in Bilayer Graphene

Nonlinear electrophoretic response yields a unique parameter for separation of biomolecules

Characterizing the Swimming Properties of Artificial Bacterial Flagella

A Lorentz model for weak magnetic field bioeffects: Part I - Thermal noise is an essential component of AC/DC effects on bound ion trajectory

A Lorentz model for weak magnetic field bioeffects: Part II - Secondary transduction mechanisms and measures of reactivity

Effects of radio frequency magnetic fields on iron release from cage proteins

Teaching cells to dance: The impact of transistor miniaturization on the manipulation of populations of living cells

On-line control of cellular adhesion with impedance measurements using interdigitated electrode structures

A CMOS chip for individual cell manipulation and detection

Impedance based biosensor array for monitoring mammalian cell behavior

Capacitive sensor array for localization of bioparticles in CMOS lab-on-a-chip

  1. Giaever I and Keese CR. A morphological biosensor for mammalian cells. Nature. 1993 Dec 9;366(6455):591-2. DOI:10.1038/366591a0 | PubMed ID:8255299 | HubMed [Giaever]

Social

Getting to Know the Public

Religious beliefs and public attitudes toward nanotechnology in Europe and the United States

Deliberating the risks of nanotechnologies for energy and health applications in the United States and United Kingdom

The legacy of Myriad for gene-based diagnostics: a new policy and regulatory option

Patents on genes, usefulness, and the requirement of industrial application

Vatican Cheers GM

Proliferation-resistant biotechnology: an approach to improve biological security

Biotech under Barack

Hearts and minds and nanotechnology

Lines of communication

Six secrets to success—how to build a sustainable biotech business

The habits of successful bioentrepreneurs

Wasting cash—the decline of the British biotech sector

Bio-art: the ethics behind the aesthetics

Merlin's maestro

Building today's platform company

The eccentric engineer (al-Jazari)

Acts of God?

Adventures in wonderland

Playing to win (Business Plan Competitions)

A different perspective on science

Essential features for proactive risk management

Designs for living

A blueprint for biotech's blues

GM fish ice cream

Beyond the biotech IPO: a brave new world

Twelve lords a-leaping



  1. Yearley S. The ethical landscape: identifying the right way to think about the ethical and societal aspects of synthetic biology research and products. J R Soc Interface. 2009 Aug 6;6 Suppl 4(Suppl 4):S559-64. DOI:10.1098/rsif.2009.0055.focus | PubMed ID:19447816 | HubMed [Yearley]

Searches

"In vivo sensor/sensing"

"In vivo instrumentation"

"Smallest antenna"

"Molecular antenna"

"Antenna Theory"