Michael R. Pina Week 4

Activity 1

• The accession number of the sequence is AF016768.
• The sequence comes from subject 1; the definition section of the record contains this information as well as other information such as which visit.
• The Biology Workbench does not seem the most user friendly, but it works just fine and gets the job done. I was able to align 4 sequences acquired from GenBank without any problems.

Activity 2

My tree (linked below) shows that at the first visit, clones within each subject are clustered pretty close together which shows that there is not a lot of divergence. Subject 3 shows the most diversity from the others as it it is the furthest from the middle point.

Files

Visit 1, subjects 1-9

Visit 1, subjects 10-15

Tree