Mimulus Community: Difference between revisions

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[[Image:Pond.jpg|thumb|right|Mimulus guttatus]]
[[Image:Pond.jpg|thumb|right|Mimulus guttatus]]
=The ''Mimulus'' Community=
=The ''Mimulus'' Community=
 
This Wiki page has not been updated since 2009.
Become a [[Mimulus membership|member]] today.


==Announcements==   
==Announcements==   
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[[Image:GroupPhotoOct07.jpg|thumb|right|Mimulus Meeting 2007 at NESCent]]
[[Image:GroupPhotoOct07.jpg|thumb|right|Mimulus Meeting 2007 at NESCent]]


*The 7x genome is now completely assembled. This will be the final assembly. Annotation is currently underway as of July 2008.
*The ''Mimulus guttatus'' IM62 genome assembly and preliminary annotation is now available for search and download from [http://www.phytozome.net/mimulus Phytozome].
*Download the [[Media:List.doc|contact info]] for people who attended the 2007 Mimulus meeting in Durham, NC.
*Download the [[Media:List.doc|contact info]] for people who attended the 2007 Mimulus meeting in Durham, NC.
*There are now 436 [[Media:Mimulus_populations_3_22_09.xls|''Mimulus'' populations]] currently stored at the Duke University Seed Stock Center, as of March 2009
*There are now 436 [[Media:Mimulus_populations_3_22_09.xls|''Mimulus'' populations]] currently stored at the Duke University Seed Stock Center, as of March 2009
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==The ''Mimulus'' Genome==
==The ''Mimulus'' Genome==
The Joint Genome Institute (JGI/DOE) completed 7X coverage of the ''Mimulus'' genome in Spring 2007.  An assembly of the 7x genome was completed in Summer 2008.  Members of the ''Mimulus'' Community are currently annotating the Genome.  The ''Mimulus'' Genome can be accessed though the private intranet at [http://www.mimulusevolution.org/ Mimulus Evolution].  This is currently a private site, but will be open to the public soon.
The Joint Genome Institute (JGI/DOE) completed 7X coverage of the ''Mimulus'' genome in Spring 2007.  An assembly of the 7x genome was completed in Summer 2008.  Members of the ''Mimulus'' Community are currently annotating the Genome and working on a final assembly of the sequenced scaffolds.  The ''Mimulus'' Genome can be accessed though [http://www.phytozome.net/ Phytozome].
 
==People==
[[Image:Good.jpg|thumb|right|Mimulus lewisii and Mimulus cardinalis with hybrids]]
{| width:100%; height:300px border="7"
|-
| '''Labs'''
*[http://rydberg.biology.colostate.edu/angert/index.html Amy Angert]
*[http://faculty.washington.edu/toby/ Toby Bradshaw]
*[[Anna Blenda]]
*[http://people.virginia.edu/~dec5z/decarr.html David Carr]
*[http://bioweb.biology.kent.edu/FacultyPages/Case/ Andrea Case]
*[http://www.ubcbotanicalgarden.org/research/cronk.php Quentin Cronk]
*[http://www.life.umd.edu/biology/dudashlab/dudashlabpage.html Michele Dudash]
*[http://dbs.umt.edu/research%5Flabs/fishmanlab/ Lila Fishman]
*[http://ag.arizona.edu/pls/faculty/gang.htm David Gang]
*[http://myweb.csuchico.edu/~ctivey/Ivey_research.html Chris Ivey]
*[http://www.uwm.edu/Dept/Biology/Docs/Faculty/karron.html Jeffery Karron]
*[http://www.ku.edu/~eeb/faculty/kellyj.html John Kelly]
*[http://www.cofc.edu/%7Emurrenc/ Courtney Murren]
*[http://www.genetics.forestry.ubc.ca/ritland/ Kermit Ritland]
*[http://plantbiology.msu.edu/faculty/faculty-research/doug-schemske/ Doug Schemske]
*[http://www.ex.ac.uk/~MRMacnai/welcome.html Mark Macnair]
*[http://www.bio.txstate.edu:16080/~martin/ Noland Martin]
*[http://www.coevolucion.cl/Rodrigo%20Medel/Rodrigo%20Medel.html Rodrigo Medel]
*[http://www3.uakron.edu/biology/mitchell/index.html Randall Mitchell]
*[http://mcb.berkeley.edu/index.php?option=com_mcbfaculty&name=rokhsard Dan Rokhsar]
*[http://www.biology.utah.edu/faculty2.php?inum=49 Bob Vickery]
*[http://visionlab.bio.unc.edu/ Todd Vision]
*[http://www.biology.duke.edu/willislab/ John Willis]
 
 
|'''Post-Docs'''
 
*[[Camille Barr]]
*[http://www.unc.edu/~ganko Eric Ganko]
*[http://purugganan.gnets.ncsu.edu/people/people.html Megan Hall]
*[http://entomology.wisc.edu/~holeski/ Liza Holeski]
*[http://www-biology.ucsd.edu/~mstreisf/ Matt Streisfeld]
*[http://www.rochester.edu/College/BIO/labs/ORRLAB/andrea.html Andrea Sweigart]
*[http://grad.bio.uci.edu/ecoevo/cwu/ Carrie Wu]
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
| '''Grad Students'''
*[http://ucsu.colorado.edu/%7Ebakerrl/index.html Rob Baker]
*[http://biotype.biology.dal.ca/mjohnst/People.html Magdalena Bartkowska]
*[http://www.genetics.forestry.ubc.ca/ritland/people.html Charles Chen]
*[[Arielle Cooley]]
*[[Katie Ferris]]
*[http://www.biology.wustl.edu/faculty/templeton/People/Nick's%20Page/Griffin.html Nick Griffin]
*[[Dena Grossenbacher]]
*[http://www.eve.ucdavis.edu/systrauss/people.htm Jon Haloin]
*[http://openwetware.org/wiki/User:Young_Wha_Lee Young Wha Lee]
*[[Deborah Lloyd]]
*[[Mimulus:David Lowry|David Lowry]]
*[[Jennifer Modliszewski]]
*[http://students.washington.edu/crp7/ Christina Pince]
*[http://www.plantsciences.ucdavis.edu/Ricelab/ Jason Sexton]
*[http://www.mobot.org/MOBOT/Research/curators/sheth.shtml Seema Sheth]
*[http://sobel.schemskelab.plantbiology.msu.edu Jay Sobel]
*[[Mimulus:Kevin Wright|Kevin Wright]]
 
 
 
 
 
 
 


|}


==Seed Collections==
==Seed Collections==
Duke University is now the home to the collection of seeds from over 425 populations of ''Mimulus''.  The seed collections are primarily composed of seeds from within the ''Mimulus guttatus'' complex. Most of these seeds can be made available for upon request.  Please allow a few weeks for orders to be fulfilled.  Contact [[David Lowry]] at david.lowry@duke.edu for seed requests.  See the
Duke University is now the home to the collection of seeds from over 425 populations of ''Mimulus''.  The seed collections are primarily composed of seeds from within the ''Mimulus guttatus'' complex. Most of these seeds can be made available for upon request.  Please allow a few weeks for orders to be fulfilled.  [[Media:‎Mimulus_populations_3_22_09.xls|Mimulus collections list]]
[[Media:Mimulus_populations_3_22_09.xls|spreadsheet of collections]] before making requests.


==Techniques==
==Techniques==

Latest revision as of 07:09, 16 November 2014

Mimulus guttatus

The Mimulus Community

This Wiki page has not been updated since 2009.

Announcements

Mimulus Meeting 2006 at Duke University
Mimulus Meeting 2007 at NESCent
  • The Mimulus guttatus IM62 genome assembly and preliminary annotation is now available for search and download from Phytozome.
  • Download the contact info for people who attended the 2007 Mimulus meeting in Durham, NC.
  • There are now 436 Mimulus populations currently stored at the Duke University Seed Stock Center, as of March 2009

The Genus Mimulus

The genus Mimulus (historically "Scrophulariaceae," order Lamiales) has been a model plant system for ecological and evolutionary genetics for over 50 years (Vickery, 1951).

  • Check out the poster of the phylogeny of the Mimulus genus.

The Mimulus Genome

The Joint Genome Institute (JGI/DOE) completed 7X coverage of the Mimulus genome in Spring 2007. An assembly of the 7x genome was completed in Summer 2008. Members of the Mimulus Community are currently annotating the Genome and working on a final assembly of the sequenced scaffolds. The Mimulus Genome can be accessed though Phytozome.


Seed Collections

Duke University is now the home to the collection of seeds from over 425 populations of Mimulus. The seed collections are primarily composed of seeds from within the Mimulus guttatus complex. Most of these seeds can be made available for upon request. Please allow a few weeks for orders to be fulfilled. Mimulus collections list

Techniques

  1. DNA Extraction Protocol
  2. Microsatellite Recipes
  3. Seed Sterilization
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