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| ==[http://openwetware.org/wiki/PGP9.09 PGP9.09 Boisterous Blueberries]== | | ==[http://openwetware.org/wiki/PGP9.09 PGP9.09 Boisterous Blueberries]== |
| September 2009, second public data release through [https://proteomecommons.org/tranche/ ProteomeCommons.org's Tranche Network]<br/>
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|
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| ====Collaborators====
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| *[[User:Andrea Loehr]] (PGP)
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| *[[User:Alexander Wait Zaranek]] (PGP)
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| *[[User:Brandon K. Grantham]] (PGP)
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| *[[User:Bryan E. Smith]] (Tranche)
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|
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| ===Content===
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| * Raw images extended to include PGP2, PGP4
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| * PGP reads from GA Pipeline 1.0
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| * PGP reads from GA Pipeline 1.3.2
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| * PGP reads from [http://sgenomics.org/swift/ Swift]
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| * Alignment results from [http://maq.sourceforge.net/maq-man.shtml MAQ]
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| * Data from '''accepted''' [http://openwetware.org/wiki/PGP:Publications Publications]
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| * [http://boinc.berkeley.edu/ BOINC] application
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| * Software
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| ** [http://wiki.github.com/xwu/trait-o-matic/download-installation Trait-O-Matic]
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| ** [http://www.usenix.org/events/usenix08/tech/full_papers/zaranek/zaranek_html/index.html Genomerator]
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| ** [http://www.eucalyptus.com/ Eucalyptus]
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| ====PeoplePower and StatusUpdate====
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| '''AL:''' <br/>
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| *collect all data on Orchestra /groups/pgp/
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| ** Andrew will make PGP4 available 05/20
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| * process data with GAP1.3.2, Swift, MAQ
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| * BOINC application
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| ** read documentation, download and use
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| ** correspond with David Anderson
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| * keep track of published/accepted data
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| ** in touch with Jay Lee
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| <br/>
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| '''AWZ:''' <br/>
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| * Software
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| * BOINC application
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| ** contact David Anderson
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| <br/>
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| '''BKG:'''<br/>
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| * BOINC application
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| ** read documentation, download and use
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| ** document progress OWW <br/>
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| <br/>
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| '''BES:'''<br/>
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| * Tranche upload
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| * fold Tranche up-/download tools into BOINC application
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| <br/>
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