Pan:Publications

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Baird NJ, Westhof E, Qin H, Pan T, Sosnick TR.  
+
*Baird NJ, Westhof E, Qin H, Pan T, Sosnick TR.  
Structure of a folding intermediate reveals the interplay between core and
Structure of a folding intermediate reveals the interplay between core and
peripheral elements in RNA folding.
peripheral elements in RNA folding.
Line 5: Line 5:
PMID: 16115647   
PMID: 16115647   
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Torres-Larios A, Swinger KK, Krasilnikov AS, Pan T, Mondragon A.  
+
*Torres-Larios A, Swinger KK, Krasilnikov AS, Pan T, Mondragon A.  
Crystal structure of the RNA component of bacterial ribonuclease P.
Crystal structure of the RNA component of bacterial ribonuclease P.
Nature. 2005 Sep 22;437(7058):584-7. Epub 2005 Aug 21.  
Nature. 2005 Sep 22;437(7058):584-7. Epub 2005 Aug 21.  
PMID: 16113684   
PMID: 16113684   
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Le TT, Harlepp S, Guet CC, Dittmar K, Emonet T, Pan T, Cluzel P.  
+
*Le TT, Harlepp S, Guet CC, Dittmar K, Emonet T, Pan T, Cluzel P.  
Real-time RNA profiling within a single bacterium.
Real-time RNA profiling within a single bacterium.
Proc Natl Acad Sci U S A. 2005 Jun 28;102(26):9160-4. Epub 2005 Jun 20.  
Proc Natl Acad Sci U S A. 2005 Jun 28;102(26):9160-4. Epub 2005 Jun 20.  
PMID: 15967986   
PMID: 15967986   
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Wong T, Sosnick TR, Pan T.  
+
*Wong T, Sosnick TR, Pan T.  
Mechanistic insights on the folding of a large ribozyme during transcription.
Mechanistic insights on the folding of a large ribozyme during transcription.
Biochemistry. 2005 May 24;44(20):7535-42.  
Biochemistry. 2005 May 24;44(20):7535-42.  
PMID: 15895996   
PMID: 15895996   
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Dittmar KA, Sorensen MA, Elf J, Ehrenberg M, Pan T.  
+
*Dittmar KA, Sorensen MA, Elf J, Ehrenberg M, Pan T.  
Selective charging of tRNA isoacceptors induced by amino-acid starvation.
Selective charging of tRNA isoacceptors induced by amino-acid starvation.
EMBO Rep. 2005 Feb;6(2):151-7.  
EMBO Rep. 2005 Feb;6(2):151-7.  
PMID: 15678157   
PMID: 15678157   
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Smith GJ, Sosnick TR, Scherer NF, Pan T.  
+
*Smith GJ, Sosnick TR, Scherer NF, Pan T.  
Efficient fluorescence labeling of a large RNA through oligonucleotide
Efficient fluorescence labeling of a large RNA through oligonucleotide
hybridization.
hybridization.
Line 31: Line 31:
PMID: 15613536   
PMID: 15613536   
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Krasilnikov AS, Xiao Y, Pan T, Mondragon A.  
+
*Krasilnikov AS, Xiao Y, Pan T, Mondragon A.  
Basis for structural diversity in homologous RNAs.
Basis for structural diversity in homologous RNAs.
Science. 2004 Oct 1;306(5693):104-7.  
Science. 2004 Oct 1;306(5693):104-7.  
PMID: 15459389   
PMID: 15459389   
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Dittmar KA, Mobley EM, Radek AJ, Pan T.  
+
*Dittmar KA, Mobley EM, Radek AJ, Pan T.  
Exploring the regulation of tRNA distribution on the genomic scale.
Exploring the regulation of tRNA distribution on the genomic scale.
J Mol Biol. 2004 Mar 12;337(1):31-47.  
J Mol Biol. 2004 Mar 12;337(1):31-47.  
PMID: 15001350   
PMID: 15001350   
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Barrera A, Pan T.  
+
*Barrera A, Pan T.  
Interaction of the Bacillus subtilis RNase P with the 30S ribosomal subunit.
Interaction of the Bacillus subtilis RNase P with the 30S ribosomal subunit.
RNA. 2004 Mar;10(3):482-92.  
RNA. 2004 Mar;10(3):482-92.  
PMID: 14970393   
PMID: 14970393   
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Xie Z, Srividya N, Sosnick TR, Pan T, Scherer NF.  
+
*Xie Z, Srividya N, Sosnick TR, Pan T, Scherer NF.  
Single-molecule studies highlight conformational heterogeneity in the early
Single-molecule studies highlight conformational heterogeneity in the early
folding steps of a large ribozyme.
folding steps of a large ribozyme.
Line 52: Line 52:
PMID: 14704266   
PMID: 14704266   
-
Sosnick TR, Pan T.  
+
*Sosnick TR, Pan T.  
RNA folding: models and perspectives.
RNA folding: models and perspectives.
Curr Opin Struct Biol. 2003 Jun;13(3):309-16. Review.  
Curr Opin Struct Biol. 2003 Jun;13(3):309-16. Review.  
PMID: 12831881   
PMID: 12831881   
-
Krasilnikov AS, Yang X, Pan T, Mondragon A.  
+
*Krasilnikov AS, Yang X, Pan T, Mondragon A.  
Crystal structure of the specificity domain of ribonuclease P.
Crystal structure of the specificity domain of ribonuclease P.
Nature. 2003 Feb 13;421(6924):760-4.  
Nature. 2003 Feb 13;421(6924):760-4.  
PMID: 12610630   
PMID: 12610630   
-
Sosnick TR, Pan T.  
+
*Sosnick TR, Pan T.  
Getting hotter with RNA.
Getting hotter with RNA.
Nat Struct Biol. 2002 Nov;9(11):795-6. No abstract available.  
Nat Struct Biol. 2002 Nov;9(11):795-6. No abstract available.  
PMID: 12402034
PMID: 12402034

Revision as of 17:45, 14 December 2005

  • Baird NJ, Westhof E, Qin H, Pan T, Sosnick TR.

Structure of a folding intermediate reveals the interplay between core and peripheral elements in RNA folding. J Mol Biol. 2005 Sep 23;352(3):712-22. PMID: 16115647

  • Torres-Larios A, Swinger KK, Krasilnikov AS, Pan T, Mondragon A.

Crystal structure of the RNA component of bacterial ribonuclease P. Nature. 2005 Sep 22;437(7058):584-7. Epub 2005 Aug 21. PMID: 16113684

  • Le TT, Harlepp S, Guet CC, Dittmar K, Emonet T, Pan T, Cluzel P.

Real-time RNA profiling within a single bacterium. Proc Natl Acad Sci U S A. 2005 Jun 28;102(26):9160-4. Epub 2005 Jun 20. PMID: 15967986

  • Wong T, Sosnick TR, Pan T.

Mechanistic insights on the folding of a large ribozyme during transcription. Biochemistry. 2005 May 24;44(20):7535-42. PMID: 15895996

  • Dittmar KA, Sorensen MA, Elf J, Ehrenberg M, Pan T.

Selective charging of tRNA isoacceptors induced by amino-acid starvation. EMBO Rep. 2005 Feb;6(2):151-7. PMID: 15678157

  • Smith GJ, Sosnick TR, Scherer NF, Pan T.

Efficient fluorescence labeling of a large RNA through oligonucleotide hybridization. RNA. 2005 Feb;11(2):234-9. Epub 2004 Dec 21. PMID: 15613536

  • Krasilnikov AS, Xiao Y, Pan T, Mondragon A.

Basis for structural diversity in homologous RNAs. Science. 2004 Oct 1;306(5693):104-7. PMID: 15459389

  • Dittmar KA, Mobley EM, Radek AJ, Pan T.

Exploring the regulation of tRNA distribution on the genomic scale. J Mol Biol. 2004 Mar 12;337(1):31-47. PMID: 15001350

  • Barrera A, Pan T.

Interaction of the Bacillus subtilis RNase P with the 30S ribosomal subunit. RNA. 2004 Mar;10(3):482-92. PMID: 14970393

  • Xie Z, Srividya N, Sosnick TR, Pan T, Scherer NF.

Single-molecule studies highlight conformational heterogeneity in the early folding steps of a large ribozyme. Proc Natl Acad Sci U S A. 2004 Jan 13;101(2):534-9. Epub 2004 Jan 2. PMID: 14704266

  • Sosnick TR, Pan T.

RNA folding: models and perspectives. Curr Opin Struct Biol. 2003 Jun;13(3):309-16. Review. PMID: 12831881

  • Krasilnikov AS, Yang X, Pan T, Mondragon A.

Crystal structure of the specificity domain of ribonuclease P. Nature. 2003 Feb 13;421(6924):760-4. PMID: 12610630

  • Sosnick TR, Pan T.

Getting hotter with RNA. Nat Struct Biol. 2002 Nov;9(11):795-6. No abstract available. PMID: 12402034

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