Pecinka lab

Centre of Plant Structural and Functional Genomics Institute of Experimental Botany of the Czech Academy of Sciences, v. v. i. Šlechtitelů 31 Olomouc, CZ-783 71 Czech Republic Contact

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Research The Pecinka lab is hosted by the Department of Plant Breeding and Genetics at the Max Planck Institute for Plant Breeding Research in Cologne, Germany. Our goal is to understand molecular and evolutionary mechanisms shaping plant genomes and epigenomes. We analyze how DNA sequence variation is generated by various mutagenic factors and how these forces are counteracted by the genome repair and maintenance mechanisms. To this end we use the model plant Arabidopsis thaliana and several other Brassicaceae and analyze them by forward and reverse genetics, molecular, biochemical, cytogenetic and bioinformatic methods. read more...

Lab Members Ahmed Abdelsamad Mariana Andrea Diaz Smoje Andreas Finke Chun Hsin Liu (Phoebe) Ales Pecinka Björn Pietzenuk Thomas Piofczyk Guest Scientists Swarit Jasial Technitians Barbara Eilts Petra Pecinkova see complete list... http://www4.clustrmaps.com/stats/maps-no_clusters/openwetware.org-wiki-Pecinka_Lab-thumb.jpg

Recent Publications Pecinka A, Abdelsamad Ahmed, Vu GTH. Hidden genetic nature of epigenetic natural variation in plants. Trends in Plant Science in press (2013) Full text de Meaux J, Pecinka A. The Arabidopsis genus: An emerging model to elucidate the molecular basis of interspecific differences in transposable element activity. Mobile Genetic Elements 2:142-144 (2012). PDF Pecinka A, Mittelsten Scheid O. Stress-induced chromatin changes: A critical view on their heritability. Plant Cell Physiology doi: 10.1093/pcp/pcs044 (2012). PDF Alcázar R, Pecinka A, Aarts MGM, Fransz PF, Koornneef M. Signals of speciation within Arabidopsis thaliana in comparison with its relatives. Curr Opin Plant Biol 15:205-211 (2012). abstract see complete list... News 2013-12-31: Happy New Year 2014! 2013-12-09: Xmas market get together 2013-10-01: Mariana Diaz starts her PhD 2013-09-30: Lab field trip to Altenahr more 2013-09-24: Andreas successfully defended his PhD at the University of Halle-Wittenberg. Congratulations!