Pecinka lab: Difference between revisions
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<h3><font style="color:#31B404;">Research</font></h3> | <h3><font style="color:#31B404;">Research</font></h3> | ||
The Pecinka lab is hosted by | The Pecinka lab is hosted by the [http://www.mpipz.mpg.de/2169/en Max Planck Institute for Plant Breeding Research] in Cologne, Germany. | ||
Our goal is to understand molecular and evolutionary mechanisms shaping plant genomes and epigenomes. We analyze how DNA sequence and chromatin changes are generated by endo- and exogenous factors and how these forces are balanced by the genome repair and epigenetic mechanisms. | Our goal is to understand molecular and evolutionary mechanisms shaping plant genomes and epigenomes. We analyze how DNA sequence and chromatin changes are generated by endo- and exogenous factors and how these forces are balanced by the genome repair and epigenetic mechanisms. For our research we use ''Arabidopsis thaliana'', several other ''Brassicaceae'', selected crops and analyze them by forward and reverse genetics, molecular, biochemical, cytogenetic and bioinformatic methods. | ||
[[Pecinka_lab:Research | read more...]] | [[Pecinka_lab:Research | read more...]] | ||
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*[[Pecinka_lab:Ales_Pecinka|Ales Pecinka]] | *[[Pecinka_lab:Ales_Pecinka|Ales Pecinka]] | ||
*[[Pecinka_lab:Mariana_Diaz|Mariana Andrea Diaz Smoje]] | *[[Pecinka_lab:Mariana_Diaz|Mariana Andrea Diaz Smoje]] | ||
*[[Pecinka_lab:Annelotte_van_Dieren|Annelotte van Dieren]] | |||
*[[Pecinka_lab:Andreas_Finke|Andreas Finke]] | *[[Pecinka_lab:Andreas_Finke|Andreas Finke]] | ||
*[[Pecinka_lab: | *[[Pecinka_lab:Karin_Kruska|Karin Kruska]] | ||
*[[Pecinka_lab:Kashif Nawaz|Kashif Nawaz]] | *[[Pecinka_lab:Kashif Nawaz|Kashif Nawaz]] | ||
*[[Pecinka_lab: | *[[Pecinka_lab:Fen_Yang|Fen Yang]] | ||
<h3><font style="color:#4169E1;">Technitians</font></h3> | <h3><font style="color:#4169E1;">Technitians</font></h3> | ||
*[[Pecinka_lab:Barbara_Eilts|Barbara Eilts]] | *[[Pecinka_lab:Barbara_Eilts|Barbara Eilts]] | ||
*[[Pecinka_lab:Petra_Pecinkova|Petra Pecinkova]] | *[[Pecinka_lab:Petra_Pecinkova|Petra Pecinkova]] | ||
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<h3><font style="color:#FF8C00;">Recent Publications</font></h3> | <h3><font style="color:#FF8C00;">Recent Publications</font></h3> | ||
* | *Willing E.M., Piofczyk T., Albert A., Winkler J.B., Schneeberger K., Pecinka A. (2016): UVR2 ensures transgenerational genome stability under simulated natural UV-B in ''Arabidopsis thaliana''. Nature Communications 7:13522. doi: 10.1038/ncomms13522. [http://www.nature.com/articles/ncomms13522 Open access] | ||
* | *Pietzenuk B., Markus C., Gaubert H., Bagwan N., Merotto A., Bucher E., Pecinka A. (2016): Recurrent evolution of heat-responsiveness in Brassicaceae COPIA elements. Genome Biology 17:209 DOI: 10.1186/s13059-016-1072-3 [https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-1072-3 Open access] | ||
*Baroux C., Pecinka A., Fuchs J., Kreth G., Schubert I., Grossniklaus I. (2016): Non-random chromosome arrangement in triploid endosperm nuclei. Chromosoma doi:10.1007/s00412-016-0578-5 [http://link.springer.com/article/10.1007/s00412-016-0578-5 Open access] | |||
*Rawat V., Abdelsamad A., Pietzenuk B., Seymour D.K., Koenig D., Weigel D., Pecinka A., Schneeberger K. (2015): Improving the Annotation of Arabidopsis lyrata Using RNA-Seq Data. PLoS One 10(9):e0137391. [http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0137391 Open access] | *Rawat V., Abdelsamad A., Pietzenuk B., Seymour D.K., Koenig D., Weigel D., Pecinka A., Schneeberger K. (2015): Improving the Annotation of Arabidopsis lyrata Using RNA-Seq Data. PLoS One 10(9):e0137391. [http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0137391 Open access] | ||
*[[Pecinka_lab:Publications|see complete list...]] | *[[Pecinka_lab:Publications|see complete list...]] | ||
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<h3><font style="color:red">News</font></h3> | <h3><font style="color:red">News</font></h3> | ||
*2016- | *2016-12-01: Fast mutation accumulation under natural UV-B without pyrimidine dimer repair. See more in our new paper [http://www.nature.com/articles/ncomms13522 Open access] | ||
*2016- | *2016-11-01: Karin and Annelotte start their master works in the group. | ||
*2016- | *2016-10-11: Transposons and heat stress. Read about evolution of heat responsiveness in ''ONSEN'' and other TEs groups in our latest paper [https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-1072-3 Open access] | ||
*2016- | *2016-09-15: Fen Yang joins the lab as new PhD student. Welcome in Cologne! | ||
*2016- | *2016-08-30: Priscilla successfully defended her B.Sc. work. Congratulations! | ||
Revision as of 02:06, 14 December 2016
Centre of Plant Structural and Functional Genomics |
ResearchThe Pecinka lab is hosted by the Max Planck Institute for Plant Breeding Research in Cologne, Germany.
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Lab MembersTechnitians
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