Prince:Intro to Mass Spectrometry Proteomics

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* [http://jcb.rupress.org/content/190/4/491.full.pdf+html Mass spectrometry–based proteomics in cell biology] - review by Walther & Mann
* [http://jcb.rupress.org/content/190/4/491.full.pdf+html Mass spectrometry–based proteomics in cell biology] - review by Walther & Mann
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* [http://www.springerlink.com/content/978-1-60761-443-2/ Proteome Bioinformatics] -  book published in 2010, free pdfs available
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* [http://www.springerlink.com/content/978-1-60761-443-2/ Proteome Bioinformatics] -  book published in 2010, free pdfs available [BYU subscription].
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* [http://www.annualreviews.org/doi/abs/10.1146/annurev-bioeng-061008-124934 Proteomics by Mass Spectrometry: Approaches, Advances, and Applications] (Yates, Ruse, and Nakorchevsky)  
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* [http://www.springerlink.com/content/978-1-60761-976-5/ Bioinformatics for Comparative Proteomics] -  book published in 2010, free pdfs available [BYU subscription].
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* [http://www.springerlink.com/content/t2854lww4371m213/#section=864259&page=1 Bioinformatics for Qualitative and Quantitative Proteomics] (chapter 15 of Bioinformatics for Omics Data)
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* [http://www.annualreviews.org/doi/abs/10.1146/annurev-bioeng-061008-124934 Proteomics by Mass Spectrometry: Approaches, Advances, and Applications] (Yates, Ruse, and Nakorchevsky)
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* [http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002277 Vitek and Kall overview of computation mass spec proteomics]
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* Matlab has a series of tutorials that are useful ('''>>doc help''' then search for '''Mass Spectrometry''')
===Relevant Hype===
===Relevant Hype===

Revision as of 13:43, 16 December 2011

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Here are some introductory resources to the field of Mass Spectrometry Proteomics. Add more as you come across them.

Relevant Hype

   "Mass spectrometry (MS) is the most comprehensive and versatile tool in large-scale proteomics"
   Q: Where do you see mass spectrometry taking the field of proteomics in the next 5 years?
     A: The future is now limitless … we can read out the proteome in a quantitative way, in a large-scale fashion… 
        We not only want to know what proteins are present in a sample, but also how they're modified…
   Q: Are there other applications we should keep our eyes out for?
     A: … new field called "interaction proteomics" … see which proteins talk to which other proteins.
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