Protein-protein interaction databases

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== See also ==
== See also ==
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OpenWetWare
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On OpenWetWare
* The [http://prince.openwetware.org/Research.html#Protein_Protein_Interactions Prince lab] present on OWW works on protein-protein interactions.
* The [http://prince.openwetware.org/Research.html#Protein_Protein_Interactions Prince lab] present on OWW works on protein-protein interactions.
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Related literature searches
Related literature searches
* search PubMed for MeSH term ''Protein Interaction Mapping'' [http://tinyurl.com/3qzxw75], major topic [http://tinyurl.com/3kn4zwn], and reviews only [http://tinyurl.com/3fnq2nv]
* search PubMed for MeSH term ''Protein Interaction Mapping'' [http://tinyurl.com/3qzxw75], major topic [http://tinyurl.com/3kn4zwn], and reviews only [http://tinyurl.com/3fnq2nv]
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Recent reviews:
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* [http://www.ncbi.nlm.nih.gov/pubmed/20221918 Databases of protein-protein interactions and complexes. Ooi et al. 2010]
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* [http://www.ncbi.nlm.nih.gov/pubmed/18095187 Computational prediction of protein-protein interactions. Skrabanek et al. 2008]
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* [http://www.ncbi.nlm.nih.gov/pubmed/18443628 ..the Human Proteotheque Initiative (HuPI). Coulombe et al. 2008]

Revision as of 10:51, 22 September 2011

Name Description Link
String Image:3stars.png database of experimental and predicted interactions http://string-db.org/
row 2, cell 1 row 2, cell 2 row 2, cell 3


String

  • collects evidence from genomic Context, high-throughput experiments, conserved coexpression, and text mining
  • easy to learn how to use, great graphical interaction map, detailed explanation of evidence
  • created by CPR, EMBL, SIB, KU, TUD, and UZH
  • latest references: [1], [2]


See also

On OpenWetWare

  • The Prince lab present on OWW works on protein-protein interactions.
  • OWW's Keating lab also works on protein-protein interactions.

Related literature searches

  • search PubMed for MeSH term Protein Interaction Mapping [3], major topic [4], and reviews only [5]

Recent reviews:

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