Protein-protein interaction databases: Difference between revisions
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== See also == | == See also == | ||
OpenWetWare | On OpenWetWare | ||
* The [http://prince.openwetware.org/Research.html#Protein_Protein_Interactions Prince lab] present on OWW works on protein-protein interactions. | * The [http://prince.openwetware.org/Research.html#Protein_Protein_Interactions Prince lab] present on OWW works on protein-protein interactions. | ||
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Related literature searches | Related literature searches | ||
* search PubMed for MeSH term ''Protein Interaction Mapping'' [http://tinyurl.com/3qzxw75], major topic [http://tinyurl.com/3kn4zwn], and reviews only [http://tinyurl.com/3fnq2nv] | * search PubMed for MeSH term ''Protein Interaction Mapping'' [http://tinyurl.com/3qzxw75], major topic [http://tinyurl.com/3kn4zwn], and reviews only [http://tinyurl.com/3fnq2nv] | ||
Recent reviews: | |||
* [http://www.ncbi.nlm.nih.gov/pubmed/20221918 Databases of protein-protein interactions and complexes. Ooi et al. 2010] | |||
* [http://www.ncbi.nlm.nih.gov/pubmed/18095187 Computational prediction of protein-protein interactions. Skrabanek et al. 2008] | |||
* [http://www.ncbi.nlm.nih.gov/pubmed/18443628 ..the Human Proteotheque Initiative (HuPI). Coulombe et al. 2008] | |||
Revision as of 08:51, 22 September 2011
| Name | Description | Link |
|---|---|---|
String 
|
database of experimental and predicted interactions | http://string-db.org/ |
| row 2, cell 1 | row 2, cell 2 | row 2, cell 3 |
String
- collects evidence from genomic Context, high-throughput experiments, conserved coexpression, and text mining
- easy to learn how to use, great graphical interaction map, detailed explanation of evidence
- created by CPR, EMBL, SIB, KU, TUD, and UZH
- latest references: [1], [2]
See also
On OpenWetWare
- The Prince lab present on OWW works on protein-protein interactions.
- OWW's Keating lab also works on protein-protein interactions.
Related literature searches
Recent reviews:
