2008

Chubiz LM, Rao CV. Computational design of orthogonal ribosomes. Nucleic Acids Res. 2008; 36(12):4038-46.
Saini S, Brown JD, Aldridge PD, Rao CV. FliZ is a post-translational activator of FlhD4C2-dependent flagellar gene expression. J Bacteriol. 2008; 190(14):4979-88.
Rao CV, Glekas GD, Ordal GW. The three adaptation systems of Bacillus subtilis chemotaxis. Trends Microbiol. 2008 [Epub ahead of print]
Brown JD, Saini S, Aldridge C, Herbert J, Rao CV, Aldridge PD. The rate of protein secretion dictates the temporal dynamics of flagellar gene expression. Mol Microbiol. 2008 [Epub ahead of print].

2007

Onsum, M, Rao, CV, A Mathematical Model for Neutrophil Gradient Sensing and Polarization, PLoS Comp. Biol. 3(3):436-450 (2007)
Lin, D, Rao CV, Slauch JM. The Salmonella SPI1 type three secretion system responds to periplasmic disulfide bond status via the flagellar apparatus and the RcsCDB system. J Bacteriol. 190(1):87-97 (2007)

Rao, C.V., Kirby, J.R., Arkin, A.P., Phosphatase localization in bacterial chemotaxis: divergent mechanisms, convergent principles, Phys. Biol. 2: 148-158 (2005)

Rao, C.V., Frenklach, M., Arkin, A.P., An allosteric model for transmembrane signal transduction in bacterial chemotaxis, J Mol Biol. 343: 291-303 (2004)
Rao, C.V., Sauro, H.M., Arkin, A.P., Putting the "Control" in Metabolic Control Analysis, 7th International Symposium on Dynamics and Control of Process Systems (2004)
Rao, C.V., Kirby, J.R., Arkin, A.P., Design and Diversity in Bacterial Chemotaxis: A Comparative Study in Escherichia coli and Bacillus subtilis, PLoS Biology 2: 0239-0252 (2004)

Rao, C.V., Rawlings, J.B., Mayne, D.Q., Constrained State Estimation for Nonlinear Discrete-Time Systems: Stability and Moving Horizon Approximations, IEEE Transactions on Automatic Control 48: 246-258 (2003)
Rao, C.V., Arkin, A.P., Stochastic chemical kinetics and the quasi-steady-state assumption: Application to the Gillespie algorithm, J. Chem. Phys. 118: 4999-5010 (2003)

Rao, C.V., Wolf, D.M., Arkin, A.P., Control, exploitation and tolerance of intracellular noise, Nature 420: 231-237 (2002)
Rao, C.V., Rawlings, J.B., Constrained Process Monitoring: Moving-Horizon Approach, AIChE Journal 48: 97-109 (2002)

Rao, C.V., Arkin, A.P., Control Motifs for Intracellular Regulatory Networks, Annu. Rev. Biomed. Eng. 3: 391-419 (2001)
Rao, C.V., Rawlings, J.B., Lee, J.H., Contrained linear state estimation - a moving horizon approach, Automatica 37: 1619-1628 (2001)

Rao, C.V., Rawlings, J.B., Linear programming and model predictive control, J. Proc. Cont. 10: 283-289 (2000)
Mayne, D.Q., Rawlings, J.B., Rao, C.V., Scokaert, P.O.M., Constrained model predictive control: Stability and optimality, Automatica 36: 789-814 (2000)

Rao, C.V., Rawlings, J.B., Steady States and Constraints in Model Predictive Control, AIChE Journal 45: 1266-1278 (1999)
Rao, C.V., Wright, S.J., Rawlings, J.B., Application of Interior-Point Methods to Model Predictive Control, JOTA 99: 723-757 (1998)