Registry of Standard Biological Models: Difference between revisions
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|bgcolor="#181860"|<font face="tahoma" size="2" color=#ffffff>A collection of models of biological parts that can be freely reused and composed with each other to produce more complex models. A draft implementation of the registry is underway and collaborators are being sought.</font> | |||
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|align="center"|'''Talk to us at''' - [[BioSysBio:abstracts/2007/Vincent_Rouilly | '''BioSysBio 2007''']], [http://www.syntheticbiology.ethz.ch/conf_2007 SB3.0], and [[Registry of Standard Biological Models/Presentation | '''iGEM Jamboree Workshop 2007''']] | |||
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|'''Goals''' | |||
*To contribute to the Open Source [[Synthetic Biology]] effort. | |||
*To store, curate and support models related to [http://parts.mit.edu physical Biobricks]. | |||
*To drive and guide the experimental characterization of BioBricks. | |||
*To enable the reuse of modular part models. | |||
*To provide a forum for modelers to contribute to the BioBricks effort. | |||
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|'''Activities''' | |||
*[[/Registry organization|Planning]] the architecture of a registry of standard biological models. | |||
*Building a [[Registry of Standard Biological Models/Model Catalog|collection]] of standard biological models. | |||
*Define a modeling description language that is: | |||
**Machine readable | |||
**Capable of describing gene expression networks | |||
**Modular (standardized defined inputs/ouputs) | |||
**Hierarchical (models are composable) | |||
**Capable of describing models that can be related to experimental data. | |||
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|width="700px" class="white" cellpadding="0"|'''Recent edits:''' | |||
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*See [[Registry of Standard Biological Models/CellML Practical|this page]] for a draft implementation. | |||
*See [[Registry_of_Standard_Biological_Models/Basic_Component_Models|this page]] for a draft on model implementations following CellML 1.1. | |||
Latest revision as of 14:49, 4 October 2007
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