Registry of Standard Biological Models/Basic Component Models/Constitutive mRNA Protein Expression Dynamic: Difference between revisions

Revision as of 11:10, 9 September 2006

Description: Constitutive mRNA/Protein expression
Hypothesis:
- central dogma: gene -> mRNA -> protein
- all hypothesis applicable to sub-parts
Inputs:
- nb-gene-copies
- time
Outputs:
- [Protein]
Characteristic parameters:
- none

Component: Constitutive_mRNA/ProteinExpression
Units:
- TBD
Imports:
- Components:
  - ConstitutivePromoter
  - mRNA
  - RBS
  - Protein

Variables:
- time (public interface = in)
- nbGeneCopies (public interface = in)
- mRNA (public interface = out / init value = 0.)
- protein (public interface = out / init value = 0.)
MathML
- none

Not too sure how to connect the components together following their import
Do I have to declare all the variables I need to use from the imported components ?
How do I 'trigger' the dynamic behaviour of the sub-components ?

@@ Line 1: / Line 1: @@
 ==ID: Constitutive mRNA/Protein expression==
+{| border="1"
+|
 *'''Description''': Constitutive mRNA/Protein expression
 *'''Hypothesis''':
@@ Line 7: / Line 9: @@
 *'''Inputs''':
 **nb-gene-copies
+**time
 *'''Outputs''':
-**[mRNA]
 **[Protein]
-*'''Internal parameters''':
+*'''Characteristic parameters''':
-** ???
+** none
+| align= "center" | [[Image:VBB_ProteinGenerator.png|thumb|left|400px|Protein Generator Architecture]]
+|}
 ==CellML structure (CellML 1.1 spec)==