Registry of Standard Biological Models/Model Catalog: Difference between revisions
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= | =Standard Biological Models Catalog= | ||
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== | ==Regulator models== | ||
{| | {| {{Table}} align="center" width="705px" | ||
! Type !! Description !! DNA part !! ID Card !! CellML File !! CellML Validated !! Experimentally Characterized !! Comments | ! Type !! Description !! DNA part !! ID Card !! CellML File !! CellML Validated !! Experimentally Characterized !! Comments | ||
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== | ==Protein coding region models== | ||
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! Type !! Description !! DNA part !! ID Card !! CellML File !! CellML Validated !! Experimentally Characterized !! Comments | ! Type !! Description !! DNA part !! ID Card !! CellML File !! CellML Validated !! Experimentally Characterized !! Comments | ||
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== | ==Inverter models== | ||
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! Type !! Description !! DNA part !! ID Card !! CellML File !! CellML Validated !! Experimentally Characterized !! Comments | ! Type !! Description !! DNA part !! ID Card !! CellML File !! CellML Validated !! Experimentally Characterized !! Comments | ||
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== | ==Composite part models== | ||
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! Type !! Description !! DNA part !! ID Card !! CellML File !! CellML Validated !! Experimentally Characterized !! Comments | ! Type !! Description !! DNA part !! ID Card !! CellML File !! CellML Validated !! Experimentally Characterized !! Comments | ||
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Latest revision as of 07:20, 26 September 2007
Standard Biological Models Catalog
Regulator models
| Type | Description | DNA part | ID Card | CellML File | CellML Validated | Experimentally Characterized | Comments |
|---|---|---|---|---|---|---|---|
 |
TetR | <bbpart>J13211</bbpart> | link | link | NO | NO | |
|
constitutive LuxR + pLuxR | <bbpart>F2620</bbpart> | link | link | NO | YES | tested in MC4100(M9) and DH5a(LB) |
|
LuxR under pLuxR control | <bbpart>J37016</bbpart> | link | link | NO | YES | tested in DH5a(LB) |
|
TBD | <bbpart>other</bbpart> | link | link | NO | NO |
Protein coding region models
| Type | Description | DNA part | ID Card | CellML File | CellML Validated | Experimentally Characterized | Comments |
|---|---|---|---|---|---|---|---|
 |
GFP | <bbpart>E0040</bbpart> | link | link | NO | YES | |
|
TBD | <bbpart>other</bbpart> | link | link | NO | NO |
Inverter models
| Type | Description | DNA part | ID Card | CellML File | CellML Validated | Experimentally Characterized | Comments |
|---|---|---|---|---|---|---|---|
 |
LacI based | <bbpart>Q04121</bbpart> | link | link | NO | NO | |
|
TetR based | <bbpart>Q04400</bbpart> | link | link | NO | NO | |
|
cI based | <bbpart>Q04510</bbpart> | link | link | NO | NO | |
|
TBD | <bbpart>other</bbpart> | link | link | NO | NO |
Composite part models
| Type | Description | DNA part | ID Card | CellML File | CellML Validated | Experimentally Characterized | Comments |
|---|---|---|---|---|---|---|---|
 |
Ring Oscillator | <bbpart>I5610</bbpart> | link | link | NO | NO | |
|
Band Detector | <bbpart>I20100</bbpart> | link | link | NO | NO | |
|
TBD | <bbpart>other</bbpart> | link | link | NO | NO |
