Registry of Standard Biological Models/Model Catalog

From OpenWetWare
Jump to navigationJump to search

Virtual BioBrick Model Catalog

Regulators models

Type Description DNA part ID Card CellML File CellML Validated Experimentally Characterized Comments
Virtual BioBrick Regulator
Virtual BioBrick Regulator
TetR <bbpart>J13211</bbpart> link link NO NO
Virtual BioBrick Regulator
Virtual BioBrick Regulator
constitutive LuxR + pLuxR <bbpart>F2620</bbpart> link link NO YES tested in MC4100(M9) and DH5a(LB)
Virtual BioBrick Regulator
Virtual BioBrick Regulator
LuxR under pLuxR control <bbpart>J37016</bbpart> link link NO YES tested in DH5a(LB)
Virtual BioBrick Regulator
Virtual BioBrick Regulator
TBD <bbpart>other</bbpart> link link NO NO

Coding Proteins models

Type Description DNA part ID Card CellML File CellML Validated Experimentally Characterized Comments
Virtual BioBrick Protein
Virtual BioBrick Protein
GFP <bbpart>E0040</bbpart> link link NO YES
Virtual BioBrick Environment
Virtual BioBrick Environment
TBD <bbpart>other</bbpart> link link NO NO


Inverters models

Type Description DNA part ID Card CellML File CellML Validated Experimentally Characterized Comments
Virtual BioBrick Protein
Virtual BioBrick Protein
LacI based <bbpart>Q04121</bbpart> link link NO NO
Virtual BioBrick Protein
Virtual BioBrick Protein
TetR based <bbpart>Q04400</bbpart> link link NO NO
Virtual BioBrick Protein
Virtual BioBrick Protein
cI based <bbpart>Q04510</bbpart> link link NO NO
Virtual BioBrick Inverter
Virtual BioBrick Inverter
TBD <bbpart>other</bbpart> link link NO NO

Assemblies models

Type Description DNA part ID Card CellML File CellML Validated Experimentally Characterized Comments
Virtual BioBrick Protein
Virtual BioBrick Protein
Ring Oscillator <bbpart>I5610</bbpart> link link NO NO
Virtual BioBrick Inverter
Virtual BioBrick Inverter
TBD <bbpart>other</bbpart> link link NO NO