Reviews

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==OpenWetWare:Reviews==
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==OpenWetWare Reviews==
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OpenWetWare:Reviews is an experiment in providing always up-to-date scientific reviews.  When a new publication comes out it can be easily incorporated into the review by OWW editors.  This should be a win-win for both the review-writer (less work) and the readers (who get a more up-to-date resource).  We'll be trying reviews with a 'curator' (as discussed for [[Consensus protocol|consensus protocols]]) as well as ones without.   
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OpenWetWare Reviews is an experiment in providing always up-to-date scientific reviews.  When a new publication comes out it can be easily incorporated into the review by OWW editors.  This should be a win-win for both the review-writer (less work) and the readers (who get a more up-to-date resource).  We'll be trying reviews with a 'curator' (as discussed for [[Consensus protocol|consensus protocols]]) as well as ones without.   
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*[[List:Reviews|Join the mailing list]] to discuss OWW:Reviews (reviews at openwetware.org)
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*[[List:Reviews|Join the mailing list]] to discuss OWW Reviews (reviews at openwetware.org)
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==Next steps==
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==Current Reviews==
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#Make a list of available reviews in PLoS and BMC (are there other OA sources that allow derivative works?).
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*[[Reviews:Directed evolution/Library construction]]
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#Wikify existing OA reviews
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*[[Reviews:Synthetic biology]]
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#Try and get the original author (or someone expert in the topic area) to be the curator for a few of the articles.
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*[[Optimality In Biology]]
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#*Leave some of the articles curator-free as a trial, still not clear if you want/need a curator.
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==Wikify existing Reviews==
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==Want to help out?==
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*At the moment it looks like we should find good reviews in PLoS and BMC journals, as they are the only journals that allow derivative works.  If there is a review in a journal where the author retains copyright, then we can ask the author to release a pre-print version under a CC license and that should work too. (see the [[OpenWetWare talk:Reviews|talk page]])
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*[[Reviews:FAQ]]
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*[[Reviews:Community portal]]
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===Search of PLoS+BMC+Review in NCBI===
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*[[Reviews:About]]
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I did this [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Select+from+History&query_key=5&WebEnv=0CRuH1TmThKoB4g0MH-QnnSArIFdirajaS-CqmMP2fGWKf6dAy3N_OvhdlTvbsg82HWh3Arb%404A8B2E4E5EE3BCD0_0013SID&WebEnvRq=1&db=pubmed search] on NCBI with the filter tab for 'Review' (268 results).  I wrote the ones below that weren't medical studies and from a cursory look appeared to be a review.  I'm not attesting to the quality, but if there's one in your field of interest take a look at it.  If it looks good consider wikifying it.
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====PLoS====
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=17069462&query_hl=5&itool=pubmed_DocSum Bacterial programmed cell death and multicellular behavior in bacteria.] (PLoS Genet.)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16846250&query_hl=5&itool=pubmed_DocSum Immunoinformatics comes of age] (PLoS Computational Biol.)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16846248&query_hl=5&itool=pubmed_DocSum Functional classification using phylogenomic inference.] (PLoS Computational Biol.)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16733541&query_hl=5&itool=pubmed_DocSum  Crossing the line: selection and evolution of virulence traits.] (PLoS Pathog.) - I particularly like "Box 1. Making Use of Morons", a good read ;)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16683038&query_hl=5&itool=pubmed_DocSum Balancing selection and its effects on sequences in nearby genome regions.] (PLoS Genet.)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16609731&query_hl=5&itool=pubmed_DocSumThe expanding universe of prion diseases.] (PLoS Pathog.)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16518468&query_hl=5&itool=pubmed_DocSum Making ends meet: repairing breaks in bacterial DNA by non-homologous end-joining.](PLoS Genet.)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15314652&query_hl=5&itool=pubmed_DocSum Unraveling the molecular basis for regenerative cellular plasticity.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15252462&query_hl=5&itool=pubmed_DocSum Translating DNA into synthetic molecules.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15252458&query_hl=5&itool=pubmed_DocSum Nanotubes make big science.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15252449&query_hl=5&itool=pubmed_DocSum Gene Duplication: The Genomic Trade in Spare Parts] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15208721&query_hl=5&itool=pubmed_DocSum Antigen-specific T cells: analyses of the needles in the haystack.] (PLoS Biology) Integrin Bidirectional Signaling: A Molecular View] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15094804&query_hl=5&itool=pubmed_DocSum The cytoskeleton in vivo.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15024422&query_hl=5&itool=pubmed_DocSum Protein nanomachines.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15024418&query_hl=5&itool=pubmed_DocSum Endosymbiosis: lessons in conflict resolution.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=14737195&query_hl=5&itool=pubmed_DocSum Channelling evolution: canalization and the nervous system.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=14737189&query_hl=5&itool=pubmed_DocSum The proteasome and the delicate balance between destruction and rescue.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=14624258&query_hl=5&itool=pubmed_DocSum
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=14691550&query_hl=5&itool=pubmed_DocSum How mammals acquire and distribute iron needed for oxygen-based metabolism.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=14691549&query_hl=5&itool=pubmed_DocSum Comparative genomics.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=14624251&query_hl=5&itool=pubmed_DocSum Current approaches to the study of movement control.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=14551913&query_hl=5&itool=pubmed_DocSum V(D)J recombination and the evolution of the adaptive immune system.] (PLoS Biology)
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=14551912&query_hl=5&itool=pubmed_DocSum Microarray analysis: genome-scale hypothesis scanning.] (PLoS Biology)
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====BMC====
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*[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16817973&query_hl=5&itool=pubmed_DocSum Molecular signatures (unique proteins and conserved indels) that are specific for the epsilon proteobacteria (Campylobacterales).] (BMC Genomics)
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==Curators wanted==
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*'''[[User:Jasonk|Jasonk]] 11:37, 6 March 2007 (EST):''' Anyone interested in being a curator for a review in their field of expertise?  I can't promise you scientific rewards yet, but I suspect this will become an accepted form of merit down the line ;)
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==Resources==
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*[http://www.pubmedcentral.nih.gov/about/openftlist.html List of OA journals] from PMC.  Any article from any of these should be licensed properly.
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*Is there an easy way to search only OA journals?
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*#use [http://www.ncbi.nlm.nih.gov/entrez/cubby.fcgi MyNCBI], and select PMC from the Search drop-down box.  Search for a term, then you should be able to click the 'tools' icon next to the results tab to add 'Open Access' filter.
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*#do a search for '''"open access"[Filter] AND YourSeachTerm''' in PMC.
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==Online Discussion of Wiki Reviews==
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* [http://www.nodalpoint.org/2007/03/07/wiki_reviews Nodalpoint - Wiki Reviews]
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* [http://pbeltrao.blogspot.com/2007/03/openwetwarereviews-jason-kelly-opened.html Pedro - Public Rambling]
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* [http://nsaunders.wordpress.com/2007/03/08/wikireviews-an-inspired-idea/ Neil Saunders - WYDIRD]
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* [http://mndoci.com/blog/2007/03/06/openwetwarereviews/ Depak - business|bytes|genes|molecules]
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__NOTOC__
__NOTOC__

Current revision

Image:Oww Reviews.png

OpenWetWare Reviews

OpenWetWare Reviews is an experiment in providing always up-to-date scientific reviews. When a new publication comes out it can be easily incorporated into the review by OWW editors. This should be a win-win for both the review-writer (less work) and the readers (who get a more up-to-date resource). We'll be trying reviews with a 'curator' (as discussed for consensus protocols) as well as ones without.

Current Reviews

Want to help out?


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