Robert W Arnold Week 14: Difference between revisions

Revision as of 16:08, 30 November 2011

Opened up excel powerpoint.
Opened our data and multiplied all 2nd sets of data by -1 to normalize it.
Then averaged the 1st set of data with the new normalized data.
Then averaged A B C averages across the board. The spreadsheet can be seen down below under the Spreadsheet Updated title.
680 or 2741 genes were found below .05 for P value.
132 erroes in 2741 genes were found by geneMAPP.
I began to look at increased factors, Alex looked at decreased.

Here is updated spreadsheet. Included 2 more columns for each set of replicates, 3rd column in each in 2nd column multiplied by -1, 4th column is average of columns 1 and new column 3.
Here is the original excel file save as a .txt file for geneMAPP.
Here is the text file given back from geneMAPP with all of the information. Here is the file in excel form which will be used to filter results. Uploaded next will be this information after it is filtered for increasing and decreasing genes.

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 *[[Media:MasterspreadsheetwithABC averagevalues.xlsx | Here]] is updated spreadsheet.  Included 2 more columns for each set of replicates, 3rd column in each in 2nd column multiplied by -1, 4th column is average of columns 1 and new column 3.
 *[[Media:MasterspreadsheetwithABC averagevalues.txt | Here]] is the original excel file save as a .txt file for geneMAPP.
-*[[Media:Mapfinderresults-Criterion1-GOrwaaaaaa.txt | Here]] is the text file given back from geneMAPP with all of the information.  Uploaded next will be this information after it is filtered for increasing and decreasing genes.
+*[[Media:Mapfinderresults-Criterion1-GOrwaaaaaa.txt | Here]] is the text file given back from geneMAPP with all of the information.  [[Media:Mapfinderresults-Criterion1-GOrwaaa.xlsx | Here]] is the file in excel form which will be used to filter results.  Uploaded next will be this information after it is filtered for increasing and decreasing genes.
 ==Links==