Salomon Garcia: Week 13

• The analysis of the data has been done and now we are reaching the second step of the process for our presentation.
• The program Genmapp was used for this portion of the experiment we found a total of 1778 errors in the genes
• These were some of the results gathered from Genmapp:(These files are in txt. format)
  • Results part 1
  • Results part 2
• Once the data was acquired than this data was filtered using excel.
• These were the parameters used in order to filter:
  • Permute P-value <0.05
  • Z score > 2
  • Number changed > 3 < 100
  • Percent changed: no percent changed
  • Here are the two files for the Increase and Decrease:(These files are in xls 97-2003 format)
    • Increase Criterion
    • Decrease Criterion

This is a view of the excel and how it was filtered:

This is folder containing all of the necessary information for the final presentation it has the mapp: (I've downloaded the folder as zip) Folder for final presentation

BIOL 398-01: Bioinformatics Lab

• Lab Journal

Salomon Garcia: Week 2	Salomon Garcia: Week 6	Salomon Garcia: Week 11
Salomon Garcia: Week 3	Salomon Garcia: Week 7	Salomon Garcia: Week 12
Salomon Garcia: Week 4	Salomon Garcia: Week 8	Salomon Garcia: Week 13
Salomon Garcia: Week 5	Salomon Garcia: Week 9	Salomon Garcia: Week 14

• Shared Journal

1. BIOL398-01/S10:Class Journal Week 2
2. BIOL398-01/S10:Class Journal Week 3
3. BIOL398-01/S10:Class Journal Week 4
4. BIOL398-01/S10:Class Journal Week 5
5. BIOL398-01/S10:Class Journal Week 6
6. BIOL398-01/S10:Class Journal Week 7
7. BIOL398-01/S10:Class Journal Week 8
8. BIOL398-01/S10:Class Journal Week 9
9. BIOL398-01/S10:Class Journal Week 11
10. BIOL398-01/S10:Class Journal Week 12
11. BIOL398-01/S10:Class Journal Week 13
12. BIOL398-01/S10:Class Journal Week 14

• Assignments

1. BIOL398-01/S10:Week 2
2. BIOL398-01/S10:Week 3
3. BIOL398-01/S10:Week 4
4. BIOL398-01/S10:Week 5
5. BIOL398-01/S10:Week 6
6. BIOL398-01/S10:Week 7
7. BIOL398-01/S10:Week 8
8. BIOL398-01/S10:Week 9
9. BIOL398-01/S10:Week 11
10. BIOL398-01/S10:Week 12
11. BIOL398-01/S10:Week 13
12. BIOL398-01/S10:Week 14

Links

• Salomon Garcia Valencia
• Bioinformatics Lab Home