Salomon Garcia: Week 4: Difference between revisions
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(→Activity 1 Part 2: pic added and answered questions.) |
(→Activity 1 Part 2: sequence and info was added) |
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# The accession number was GenBank: AF016760.1. | # The accession number was GenBank: AF016760.1. | ||
# This sequence was from subject 1. GenBank and the Fasta both contain where the section of HIV came from. | # This sequence was from subject 1. GenBank and the Fasta both contain where the section of HIV came from. | ||
====Activity 1 Part 3==== | |||
* In this portion of the activity I used 4 of the sequences from the Markham study. I ran a ClustalW with the Biology workbench website. this was the sequence: | |||
[[Image:sequence_alignment.jpg|thumb|center|Sequences]] |
Revision as of 12:59, 9 February 2010
Week 4 Entry
Activity 1 Part 1
- Pubmed:
- How did you searh for the PubMed entry?
- What oher ways might you have searched?
- What other types of related information are available?
- I searched for the original paper by typing in the entire title of the research paper into the search box and the window showed the paper that was written in 1998.
- Another way I could have searched for it was by doing an advanced search and using the authors name on the search.
- There were other information that was useful as was the information that described what HIV-1 is.
Activity 1 Part 2
- GenBank:
- What was the accession number of the sequence you chose?
- Which subject of the study was that HIV sequence from? Which section of the record contains information about who the HIV was collected from?
- The accession number was GenBank: AF016760.1.
- This sequence was from subject 1. GenBank and the Fasta both contain where the section of HIV came from.
Activity 1 Part 3
- In this portion of the activity I used 4 of the sequences from the Markham study. I ran a ClustalW with the Biology workbench website. this was the sequence: