Satya Arjunan: Difference between revisions
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==background== | [[Image:satya.arjunan.png]] | ||
===background=== | |||
I am currently attached to the E-Cell Project at Keio University. I am a PhD candidate supported by the Japanese Government (Monbukagakusho) scholarship. My past research includes protein secondary structure prediction and distributed parallel computing. I completed my masters at Universiti Teknologi Malaysia in 2003. | I am currently attached to the E-Cell Project at Keio University. I am a PhD candidate supported by the Japanese Government (Monbukagakusho) scholarship. My past research includes protein secondary structure prediction and distributed parallel computing. I completed my masters at Universiti Teknologi Malaysia in 2003. | ||
| Line 6: | Line 8: | ||
Advisor: Professor Masaru Tomita | Advisor: Professor Masaru Tomita | ||
==software== | ===software=== | ||
[[Cellogica]] | [[Cellogica]] | ||
==publication== | ===publication=== | ||
*Takahashi, K., Arjunan, S. N. V. and Tomita, M. (March 2005). Space in systems biology of signaling pathways – towards intracellular molecular crowding in silico. FEBS Letters 579(8): 1783-1788. | *Takahashi, K., Arjunan, S. N. V. and Tomita, M. (March 2005). Space in systems biology of signaling pathways – towards intracellular molecular crowding in silico. FEBS Letters 579(8): 1783-1788. | ||
==conference== | ===conference=== | ||
*Arjunan, S. N. V., Takahashi, K. and Tomita, M. (Nov 2003). Shared-Memory Multiprocessing of Gillespie's Stochastic Simulation Algorithm on E-Cell 3. In Proceedings of the Fourth International Conference on Systems Biology (ICSB 2003), St. Louis, USA. | *Arjunan, S. N. V., Takahashi, K. and Tomita, M. (Nov 2003). Shared-Memory Multiprocessing of Gillespie's Stochastic Simulation Algorithm on E-Cell 3. In Proceedings of the Fourth International Conference on Systems Biology (ICSB 2003), St. Louis, USA. | ||
*Takahashi, K., Sakurada, T., Kaizu, K., Kitayama, T., Arjunan, S. N. V., Ishida, T., Bereczki, G., Ito, D., Sugimoto, M., Komori, T., Seiji, O. and Tomita, M. (2003). E-CELL System Version 3: A Software Platform for Integrative Computational Biology. In Genome Informatics 2003, M. Gribskov, M. Kanehisa, S. Miyano, and T. Takagi (eds.) Universal Academy Press, Tokyo. Pages: 294-295 | *Takahashi, K., Sakurada, T., Kaizu, K., Kitayama, T., Arjunan, S. N. V., Ishida, T., Bereczki, G., Ito, D., Sugimoto, M., Komori, T., Seiji, O. and Tomita, M. (2003). E-CELL System Version 3: A Software Platform for Integrative Computational Biology. In Genome Informatics 2003, M. Gribskov, M. Kanehisa, S. Miyano, and T. Takagi (eds.) Universal Academy Press, Tokyo. Pages: 294-295 | ||
== | ===talk=== | ||
*Arjunan, S. N. V. (March 2005). Mesoscale Simulation Approaches in Systems Biology: Recent Advances and Future Directions. Workshop on Particle Methods and Mesoscale Simulation of Liquids, Warrington, U. K. | *Arjunan, S. N. V. (March 2005). Mesoscale Simulation Approaches in Systems Biology: Recent Advances and Future Directions. Workshop on Particle Methods and Mesoscale Simulation of Liquids, Warrington, U. K. | ||
==contact== | ===contact=== | ||
satya@[].keio.ac.jp [sfc] <br> | |||
+81-235-29-0800 (phone) <br> | +81-235-29-0800 (phone) <br> | ||
+81-235-29-0809 (fax) <br> | +81-235-29-0809 (fax) <br> | ||
Revision as of 04:59, 23 May 2006
background
I am currently attached to the E-Cell Project at Keio University. I am a PhD candidate supported by the Japanese Government (Monbukagakusho) scholarship. My past research includes protein secondary structure prediction and distributed parallel computing. I completed my masters at Universiti Teknologi Malaysia in 2003.
At present, I am working on a spatial simulation algorithm with applications in molecular systems biology.
Advisor: Professor Masaru Tomita
software
publication
- Takahashi, K., Arjunan, S. N. V. and Tomita, M. (March 2005). Space in systems biology of signaling pathways – towards intracellular molecular crowding in silico. FEBS Letters 579(8): 1783-1788.
conference
- Arjunan, S. N. V., Takahashi, K. and Tomita, M. (Nov 2003). Shared-Memory Multiprocessing of Gillespie's Stochastic Simulation Algorithm on E-Cell 3. In Proceedings of the Fourth International Conference on Systems Biology (ICSB 2003), St. Louis, USA.
- Takahashi, K., Sakurada, T., Kaizu, K., Kitayama, T., Arjunan, S. N. V., Ishida, T., Bereczki, G., Ito, D., Sugimoto, M., Komori, T., Seiji, O. and Tomita, M. (2003). E-CELL System Version 3: A Software Platform for Integrative Computational Biology. In Genome Informatics 2003, M. Gribskov, M. Kanehisa, S. Miyano, and T. Takagi (eds.) Universal Academy Press, Tokyo. Pages: 294-295
talk
- Arjunan, S. N. V. (March 2005). Mesoscale Simulation Approaches in Systems Biology: Recent Advances and Future Directions. Workshop on Particle Methods and Mesoscale Simulation of Liquids, Warrington, U. K.
contact
satya@[].keio.ac.jp [sfc]
+81-235-29-0800 (phone)
+81-235-29-0809 (fax)
Institute for Advanced Biosciences
Keio University
14-1, Baba-cho, Tsuruoka
Yamagata, 997-0035 Japan
