Shivum Desai Journal Week 4: Difference between revisions

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==Methods==
==Methods==
 
#First off the data files "visit_1_S1_S9.txt" and "visit_1_S10_S15.txt" were uploaded onto the Biology Workbench. In the nucleic acid section
#The next step was to select 3 clones from 4 different subject, resulting in 12 total sequences.
#These sequences then were analyzed using the CLUSTALw tool which allowed for multiple sequence alignment and the generation of a distance tree comparing all 12 sequences.


==Results==
==Results==

Revision as of 15:30, 20 September 2016

Exploring HIV Evolution: An Opportunity For Research- Week 4 Continuation

Purpose

Methods

  1. First off the data files "visit_1_S1_S9.txt" and "visit_1_S10_S15.txt" were uploaded onto the Biology Workbench. In the nucleic acid section
  2. The next step was to select 3 clones from 4 different subject, resulting in 12 total sequences.
  3. These sequences then were analyzed using the CLUSTALw tool which allowed for multiple sequence alignment and the generation of a distance tree comparing all 12 sequences.

Results

Data Files

HIV Sequences

References

Useful Links

Acknowledgments

I would like to thank Dr. Dahlquist for her help on this assignment. As well as the help of Zachary T. Goldstein who was my partner in this experiment.