Skatebro:Project08: Difference between revisions
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==Tools== | ==Tools== | ||
*[http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=search&db=pubmed pubmed] | |||
*[http://www.ncbi.nlm.nih.gov/blast/Blast.cgi BLAST] | |||
*[http://parts.mit.edu/registry/index.php/Main_Page Registry Main Page] | |||
*[http://slam.bs.jhmi.edu/cgi-bin/gd/gdRandDNA.cgi random DNA sequence generator] | *[http://slam.bs.jhmi.edu/cgi-bin/gd/gdRandDNA.cgi random DNA sequence generator] | ||
*[http://slam.bs.jhmi.edu/cgi-bin/gd/gdRevTrans.cgi reverse translate] | *[http://slam.bs.jhmi.edu/cgi-bin/gd/gdRevTrans.cgi reverse translate] | ||
*[http://slam.bs.jhmi.edu/cgi-bin/gd/gdRevTrans.cgi design a codon optimized gene] | *[http://slam.bs.jhmi.edu/cgi-bin/gd/gdRevTrans.cgi design a codon optimized gene] | ||
*Consider when choosing spacer/flanker dna: [[Non-functional DNA sequences]] | *Consider when choosing spacer/flanker dna: [[Non-functional DNA sequences]] | ||
*[http://www.idtdna.com/analyzer/Applications/DilutionCalc/ stock dilution calculator] | |||
*[http://www.idtdna.com/analyzer/Applications/OligoAnalyzer/ oligoanalyzer] | |||
*[http://www.neb.com/nebecomm/tech_reference/general_data/genetic_code.asp the genetic code] | |||
*[http://tools.neb.com/NEBcutter2/index.php NEBcutter RE analyzer] | |||
*[http://www.thelabrat.com/restriction/index.shtml RE compatability] | |||
*[http://www.neb.com/nebecomm/default.asp New England BioLabs] | |||
*[http://ecocyc.org/ ecocyc e. coli metabolic pathways] | |||
*[http://cgsc.biology.yale.edu/index.php CGSC coli genetic stock center] | |||
*[http://river.mit.edu/mitlibweb/FMPro?-db=RS_Items.fp5&-Lay=web&-format=ro_search.htm&-findany Vera MIT journal reserve search] |
Revision as of 23:38, 6 February 2008
Protocols
- Skatebro:Pouring_Plates
- Skatebro:Primer_Design
- Skatebro:PCR
- Skatebro:Digestion
- Skatebro:Ligation
- Skatebro:Transformation
- Skatebro:Electrophoresis_Gels
- Skatebro:Sequencing_Prep
Notes
- Papers: Skatebro:Notes_Papers
- Presentations: Skatebro:Notes_Presentations
- Other: Skatebro:Notes_Other
Tools
- pubmed
- BLAST
- Registry Main Page
- random DNA sequence generator
- reverse translate
- design a codon optimized gene
- Consider when choosing spacer/flanker dna: Non-functional DNA sequences
- stock dilution calculator
- oligoanalyzer
- the genetic code
- NEBcutter RE analyzer
- RE compatability
- New England BioLabs
- ecocyc e. coli metabolic pathways
- CGSC coli genetic stock center
- Vera MIT journal reserve search