Smolke:Journal Club: Difference between revisions
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{{Smolke_Top}} | {{Smolke_Top}} | ||
=Next Meeting= | =Next Meeting= | ||
*When: | *When: 12/1 2pm | ||
*Where: Y2E2 362 (3rd floor, Green corner) | *Where: Y2E2 362 (3rd floor, Green corner) | ||
*Paper: | *Paper: TBD | ||
*Moderator: | *Moderator: TBD | ||
==Suggested Future Papers== | ==Suggested Future Papers== | ||
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#Bond-Watts BB, Bellerose RJ and Chang MC. Enzyme mechanism as a kinetic control element for designing synthetic biofuel pathways. Nature Chemical Biology. April 2011. 222-227. | #Bond-Watts BB, Bellerose RJ and Chang MC. Enzyme mechanism as a kinetic control element for designing synthetic biofuel pathways. Nature Chemical Biology. April 2011. 222-227. | ||
#Shen, Claire R., Lan, Ethan I., Dekishima, Yasumasa, Baez, Antonino, Cho, Kwang Myung, Liao, James C. High titer anaerobic 1-butanol synthesis in Escherichia coli enabled by driving forces. Appl. Environ. Microbiol. 2011 0: AEM.03034-10 | #Shen, Claire R., Lan, Ethan I., Dekishima, Yasumasa, Baez, Antonino, Cho, Kwang Myung, Liao, James C. High titer anaerobic 1-butanol synthesis in Escherichia coli enabled by driving forces. Appl. Environ. Microbiol. 2011 0: AEM.03034-10 | ||
#The arsenic bacteria paper, the 8 technical comments, and the authors' reply. | #The arsenic bacteria paper, the 8 technical comments, and the authors' reply. | ||
#Paige, J.S., et al. RNA Mimics of Green Fluorescent Protein. Science 29 July 2011: 333, 642-646. | #Paige, J.S., et al. RNA Mimics of Green Fluorescent Protein. Science 29 July 2011: 333, 642-646. | ||
#Poliseno L, Salmena L, Zhang J, Carver B, Haveman WJ, Pandolfi PP. A coding-independent function of gene and pseudogene mRNAs regulates tumour biology. Nature. 2010 Jun 24;465(7301):1033-8. | #Poliseno L, Salmena L, Zhang J, Carver B, Haveman WJ, Pandolfi PP. A coding-independent function of gene and pseudogene mRNAs regulates tumour biology. Nature. 2010 Jun 24;465(7301):1033-8. | ||
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==Voting on Papers== | ==Voting on Papers== | ||
*'''Bond-Watts et al.''' and '''Shen | *'''Bond-Watts et al.''' and '''Shen et al.''': | ||
*'''Arsenic + comments''': | |||
*'''Arsenic + comments | *'''Paige et al.''': | ||
*'''Poliseno et al.''' and '''Salmena et al''': | |||
*'''Paige et al.''': | *'''Porter et al.''': | ||
*'''Poliseno et al.''' and '''Salmena et al''': | *'''Conrado et al.''': | ||
*'''Porter et al.''': | |||
*'''Conrado et al.''': | |||
==Past Papers== | ==Past Papers== | ||
<biblio> | <biblio> | ||
#Dellomonaco C, Clomburg JM, Miller EN, Gonzalez R. Engineered reversal of the β-oxidation cycle for the synthesis of fuels and chemicals. Nature. 2011 Aug 10. | |||
#Dymond JS, Richardson SM, Coombes CE, Babatz T, Muller H, Annaluru N, Blake WJ, Schwerzmann JW, Dai J, Lindstrom DL, Boeke AC, Gottschling DE, Chandrasegaran S, Bader JS, Boeke JD. Synthetic chromosome arms function in yeast and generate phenotypic diversity by design. Nature. 2011 Sep 14;477(7365):471-6. doi: 10.1038/nature10403. | #Dymond JS, Richardson SM, Coombes CE, Babatz T, Muller H, Annaluru N, Blake WJ, Schwerzmann JW, Dai J, Lindstrom DL, Boeke AC, Gottschling DE, Chandrasegaran S, Bader JS, Boeke JD. Synthetic chromosome arms function in yeast and generate phenotypic diversity by design. Nature. 2011 Sep 14;477(7365):471-6. doi: 10.1038/nature10403. | ||
#Xie Z., Liu S.J., Bleris L. and Benenson Y. Logic integration of mRNA signals by an RNAi-based molecular computer. Nucleic Acids Research 2010 38, 2692-2701. and Leisner M., Bleris L., Lohmueller J., Xie Z. and Benenson Y. Rationally designed logic integration of regulatory signals in mammalian cells. Nature Nanotechnology 2010 5(9), 666-670. | #Xie Z., Liu S.J., Bleris L. and Benenson Y. Logic integration of mRNA signals by an RNAi-based molecular computer. Nucleic Acids Research 2010 38, 2692-2701. and Leisner M., Bleris L., Lohmueller J., Xie Z. and Benenson Y. Rationally designed logic integration of regulatory signals in mammalian cells. Nature Nanotechnology 2010 5(9), 666-670. | ||
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==Aged Out== | ==Aged Out== | ||
#Schwanhäusser B, Busse D, Li N, Dittmar G, Schuchhardt J, Wolf J, Chen W, Selbach M. Global quantification of mammalian gene expression control. Nature. 2011 May 19;473(7347):337-42. | |||
#Isaacs, F.J., et al. Precise Manipulation of Chromosomes in Vivo Enables Genome-Wide Codon Replacement. Science 15 July 2011: 333 (6040), 348-353. | |||
#Huo YX, Cho KM, Rivera JG, Monte E, Shen CR, Yan Y, Liao JC. Conversion of proteins into biofuels by engineering nitrogen flux. Nat Biotechnol. 2011 Mar 6. | #Huo YX, Cho KM, Rivera JG, Monte E, Shen CR, Yan Y, Liao JC. Conversion of proteins into biofuels by engineering nitrogen flux. Nat Biotechnol. 2011 Mar 6. | ||
#Gevorg Grigorya, Yong Ho Kim, Rudresh Acharya, Kevin Axelrod, Rishabh M. Jain, Lauren Willis, Marija Drndic, James M. Kikkawa, William F. DeGrado. Computational Design of Virus-Like Protein Assemblies on Carbon Nanotube Surfaces. Science 332, 1071 (2011);DOI: 10.1126/science.1198841 | #Gevorg Grigorya, Yong Ho Kim, Rudresh Acharya, Kevin Axelrod, Rishabh M. Jain, Lauren Willis, Marija Drndic, James M. Kikkawa, William F. DeGrado. Computational Design of Virus-Like Protein Assemblies on Carbon Nanotube Surfaces. Science 332, 1071 (2011);DOI: 10.1126/science.1198841 |
Revision as of 13:44, 3 November 2011
Next Meeting
Suggested Future PapersNote: The biblio extension is broken. Suggested papers need full references.
Comments on PapersVoting on Papers
Past Papers
Aged Out
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