Smolke:Journal Club

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==Voting on Papers==  
==Voting on Papers==  
*'''Leonard et al.''':Mike, Josh, Stephanie, Kate
*'''Leonard et al.''':Mike, Josh, Stephanie, Kate
-
*'''Poliseno et al.''':Kathy, Yen-Hsiang, Joe, Jay
+
*'''Poliseno et al.''':Kathy, Yen-Hsiang, Joe, Jay, DK
*'''O'Shaughnessy et al.''': PDJ, Joe, Ryan
*'''O'Shaughnessy et al.''': PDJ, Joe, Ryan
*'''Matzas et al. and Kosuri et al.''':Mike, remus
*'''Matzas et al. and Kosuri et al.''':Mike, remus

Revision as of 00:21, 4 February 2011

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Contents

Next Meeting

  • When:
  • Where:
  • Paper:
  1. []
  • Moderator:

Suggested Future Papers

Note: The biblio extension is broken. Suggested papers need full references.

  1. Leonard E, Ajikumar PK, Thayer K, Xiao WH, Mo JD, Tidor B, et al. Combining metabolic and protein engineering of a terpenoid biosynthetic pathway for overproduction and selectivity control. Proc Natl Acad Sci U S A.107(31):13654-9. PMCID: 2922259.
  2. Poliseno L, Salmena L, Zhang J, Carver B, Haveman WJ, Pandolfi PP. A coding-independent function of gene and pseudogene mRNAs regulates tumour biology. Nature.465(7301):1033-8.
  3. O'Shaughnessy EC, Palani S, Collins JJ, Sarkar CA. Tunable Signal Processing in Synthetic MAP Kinase Cascades. Cell.144(1):119-31.
  4. Matzas M, Stahler PF, Kefer N, Siebelt N, Boisguerin V, Leonard JT, et al. High-fidelity gene synthesis by retrieval of sequence-verified DNA identified using high-throughput pyrosequencing. Nat Biotechnol.28(12):1291-4.
  5. Kosuri S, Eroshenko N, Leproust EM, Super M, Way J, Li JB, et al. Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips. Nat Biotechnol.28(12):1295-9.
  6. Wolfe-Simon F, Blum JS, Kulp TR, Gordon GW, Hoeft SE, Pett-Ridge J, Stolz JF, Webb SM, Weber PK, Davies PC, Anbar AD, Oremland RS. A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus. Science. 2010 Dec 2.
  7. Churchman LS, Weissman JS. Nascent transcript sequencing visualizes transcription at nucleotide resolution. Nature.469(7330):368-73.
  8. Tamsir, A, Tabor, JJ, Voigt, CA. Robust multicellular computing using genetically encoded NOR gates and chemical ‘wires’. Nature 469,212–215(13 January 2011)
  9. Regot S, Macia J. et. al. Distributed biological computation with multicellular engineered networks. Nature. 2011 Jan 13;469(7329):207-11
  10. Wörsdörfer B, Woycechowsky KJ, and Hilvert, D. Directed Evolution of a Protein Container. Science 4 February 2011: 331 (6017), 589-592.

Comments on Papers

Voting on Papers

  • Leonard et al.:Mike, Josh, Stephanie, Kate
  • Poliseno et al.:Kathy, Yen-Hsiang, Joe, Jay, DK
  • O'Shaughnessy et al.: PDJ, Joe, Ryan
  • Matzas et al. and Kosuri et al.:Mike, remus
  • Wolfe-Simon et al.:
  • Churchman and Weissman: Josh, PDJ, Megan, Andy
  • Tamsir et al. and Regot et al.:Kathy, Yen-Hsiang, Megan, Andy, Stephanie, Ryan, Brent, Melina

Next Month:

  • Wörsdörfer et al.:

Past Papers

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  1. Error fetching PMID 20671186: [schirmer]
  2. Error fetching PMID 20453864: [sinha]
  3. Error fetching PMID 20154731: [neumann]
  4. Error fetching PMID 19745116: [drinnenberg]
  5. Error fetching PMID 19648908: [dueber]
  6. Error fetching PMID 19633652: [wang]
  7. Error fetching PMID 19079053: [yu]
  8. Error fetching PMID 19131595: [lincoln]
  9. Error fetching PMID 19234448: [lam]
  10. Error fetching PMID 19279212: [nevozhay]
All Medline abstracts: PubMed HubMed

Aged Out

  1. Lartigue C, Vashee S, Algire MA, Chuang RY, Benders GA, Ma L, et al. Creating bacterial strains from genomes that have been cloned and engineered in yeast. Science. 2009;325(5948):1693-6.
  2. Iliopoulos D, Hirsch HA, Struhl K. An epigenetic switch involving NF-kappaB, Lin28, Let-7 MicroRNA, and IL6 links inflammation to cell transformation. Cell. 2009;139(4):693-706. PMCID: 2783826.
  3. Agresti JJ, Antipov E, Abate AR, Ahn K, Rowat AC, Baret JC, et al. Ultrahigh-throughput screening in drop-based microfluidics for directed evolution. Proc Natl Acad Sci U S A.107(9):4004-9. PMCID: 2840095.
  4. Verhounig A, Karcher D, Bock R. Inducible gene expression from the plastid genome by a synthetic riboswitch. Proc Natl Acad Sci U S A.107(14):6204-9. PMCID: 2852001.
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  1. Error fetching PMID 14726590: [zhang]
  2. Error fetching PMID 19666472: [antonczak]
  3. Error fetching PMID 20175178: [zhou]
  4. Error fetching PMID 20185727: [to]
  5. Error fetching PMID 19265475: [jones]
  6. Error fetching PMID 19377462: [ellis]
  7. Error fetching PMID 19416889: [liu]
  8. Error fetching PMID 19589923: [burns]
  9. Error fetching PMID 19478183: [friedland]
  10. Error fetching PMID 19536156: [mitchell]
  11. Error fetching PMID 19359587: [kudla]
  12. Error fetching PMID 19098893: [ray]
  13. Error fetching PMID 19151732: [ranguphan]
  14. Error fetching PMID 19135890: [han]
  15. Error fetching PMID 15875027: [fung]
  16. Error fetching PMID 19327819: [cantone]
  17. Error fetching PMID 19359021: [kempe]
  18. Error fetching PMID 19494908: [tokuriki]
  19. Error fetching PMID 19578359: [eldar]
All Medline abstracts: PubMed HubMed
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