Smolke:Protocols: Difference between revisions

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==Protocols==
==Protocols==


===Mammalian Cell Protocols===
===Cloning===
:*[[Smolke:Protocols/Primer Design|Primer Design]]
:*[[Smolke:Protocols/Plasmid prep|Plasmid prep with Epoch columns and homemade buffers]]
:*[[Smolke:Protocols/Insert prep|PCR amplifying inserts from plasmids]]
:*[[Smolke:Protocols/DNA purification|When to use phenol-chloroform vs. columns]]
:*[[Smolke:Protocols/Digests|Restriction digests]]
:*[[Smolke:Protocols/Gel extraction|Gel extraction]]
:*[[Smolke:Protocols/Ligation|Ligation]]
:*[[Smolke:Protocols/Transformation|Electrocompetent Transformation]]
:*[[Smolke:Protocols/Heat Shock Transformation|Heat Shock Transformation]]
:*[[Smolke:Protocols/Screening|Colony PCR]]
:*[[Smolke:Protocols/Digest Screening|Screening by digestion]]
:*[[Smolke:Protocols/Sequencing|Sequencing with Elim]]
:*[[Smolke:Protocols/Freezer stocks|Making freezer stocks]]
:*[[Smolke:Protocols/DNA assembly|DNA assembly]]
:*[[Smolke:Protocols/EtBr stock|EtBr stock]]


====Observations and Discussion====
===Yeast===
:'''Protocols'''
:*[[Smolke:Protocols/Yeast Media Recipes | Yeast Media Recipes]]
:*[[Smolke:Protocols/Dropout plates|Pouring yeast dropout plates]]
:*[[Smolke:Protocols/Yeast transformation|Yeast plasmid transformation]]
:*[[Smolke:Protocols/Quick yeast transformation|Quick Yeast plasmid transformation]]
:*[[Smolke:Protocols/Yeast Colony PCR|Yeast colony PCR]]
:*[[Smolke:Protocols/Western|Anti-V5 Western]]
:*[[Smolke:Protocols/Library_transformation|Library-scale yeast transformations & Gap repair]]
:*[[Smolke:Protocols/Chromosomal Modification|Yeast chromosomal modifications]]
:*[[Smolke:Protocols/Yeast plasmid prep|Yeast plasmid prep]]
:*[[Smolke:Protocols/Feeding yeast cultures|Feeding yeast cultures]]
:*[[Smolke:Protocols/Yeast metabolite extraction|Yeast metabolite extraction]]
:*[[Smolke:Protocols/Heme measurements|Heme measurements]]
:'''Observations and Discussion'''
:*[http://wiki.yeastgenome.org/index.php/CommunityW303.html CSY3]


===Yeast Protocols===
===Tissue Culture room===
*[[Smolke:Dropout plates|Pouring yeast dropout plates]]
:*[[Smolke:Protocols/Adherent cell care and feeding|Adherent cell care and feeding]]
:*[[Smolke:Protocols/Media stocks|Media stocks]]
:*[[Smolke:Protocols/Freezer stock management and database|Freezer stock management and database]]
:*[[Smolke:Protocols/General Maintenance|General maintenance]]
:*[[Smolke:Protocols/General Sterility|General sterility]]


====Observations and Discussion====
===Quanta===
*[[Smolke:Yeast DNA Prep|Prepping Yeast DNA]]
:*[[Smolke:Protocols/Preventing Clogs|Preventing Clogs]]
:*[[Smolke:Protocols/Clearing Clogs|Clearing Clogs]]


===Bacteria Protocols===
===VYB===
:*[[Smolke:Protocols/Guidelines|Guidelines]]


====Observations and Discussion====
===Miscellaneous===
 
:*[[Smolke:Protocols/Glass Beads|Glass Beads]]
===Flow Cytometer===
:*[[Smolke:Protocols/Printing Posters|Poster Printing]]
*[[Despaux:Ma_FlowCyCompensation|Compensation]]
:*[[Smolke:Protocols/Pipet-Aid|My pipet-aid is broken!]]
 
:*[[Smolke:Protocols/Cleaning Bottles for the LC|Cleaning Bottles for the LC]]
====Observations and Discussion====
:*[[Smolke:Protocols/96-well plates|96-well plates]]


===Miscellaneous===
==Solutions==
*[[Smolke:Coffee|Making coffee]]
*[[Smolke:Protocols/Pfu Buffer|Pfu Buffer]]
*[[Smolke:Lab drinks|Lab drinks]]
*[[Smolke:Protocols/Taq Buffer|Taq Buffer]]
*[[Smolke:Protocols/DO Media|10x DO Media]]
*[[Smolke:Protocols/dNTP Mixture|dNTP Mixture]]
*[[Smolke:Protocols/5FOA|5-Fluoroorotic acid]]
*[[Smolke:Protocols/Antibiotics|Antibiotic Stocks]]

Latest revision as of 16:21, 17 February 2014