Smolke:Protocols/Yeast transformation: Difference between revisions

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==Materials==
*YPD
*Sterile water
*Lithium Acetate/TE: 0.1M LiAc, 10mM Tris, 1mM EDTA, pH 7.5 (Mix 1mL 10x LiAc + 1mL 10x TE + 8mL sterile water)
*40% PEG: 40% PEG, 0.1M LiAc, 10mM Tris, 1mM EDTA, pH 7.5 (Mix 1mL 10x LiAc + 1mL 10x TE + 8mL 50% PEG)
**I've seen protocols use different molecular weights of PEG. 3000-4000 seems pretty common
*Salmon sperm DNA ('SSD', 10 ug/uL, stored at -20C)
*Plasmid DNA
 
==Procedure==
===Day 0===
Grow an overnight culture of your chosen yeast strain in appropriate media
 
===Day 1===
#In the morning, dilute overnight culture 1:100 (~OD 0.1) into fresh media. Use 5mL fresh media per transformation.
#Grow the culture to OD 0.4-0.8 (3.5-4.5 hr)
#*If you're transforming a plasmid, you don't need high efficiency. Just pull the culture whenever it's convenient.
#Prepare your solutions - put the water, LiAc/TE, and 40% PEG on ice. Thaw the SSD, make an aliquot into a PCR tube, incubate it at 95C for ~5 minutes, then chill on ice.
#Pellet cells at 6000g for 5 minutes at 4C. Resuspend in 2mL sterile water per transformation (so 10mL water for 5 transformations).
#Repellet. Resuspend in 200uL sterile water per transformation.
#Repellet. Resuspend in 200uL LiAc/TE per transformation.
#Repellet. Resuspend in 50uL LiAc/TE per transformation. Add 5uL SSD per transformation. Aliquot into chilled eppendorf tubes, 55uL per tube.
#Add DNA to each tube. 1uL of a prep is usually more than necessary.
#Add 300uL 40% PEG to each tube. Pipet to resuspend (shouldn't see any streaks after resuspension)
#Incubate in the spinner at 30C for 30 minutes (~2hr if using his3/his5)
#Heat shock in 42C water bath for 15 minutes
#Spin down, remove PEG
#If using G418, resuspend in 1mL YPD, incubate at 30C for ~2hr, then repellet
#Resuspend in 100uL sterile water, plate on appropriate dropout plates
 
===Day 3===
Colonies should be ready. Some strains/plasmids may take an extra day.
 
==Notes==

Revision as of 17:37, 20 October 2009

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Materials

  • YPD
  • Sterile water
  • Lithium Acetate/TE: 0.1M LiAc, 10mM Tris, 1mM EDTA, pH 7.5 (Mix 1mL 10x LiAc + 1mL 10x TE + 8mL sterile water)
  • 40% PEG: 40% PEG, 0.1M LiAc, 10mM Tris, 1mM EDTA, pH 7.5 (Mix 1mL 10x LiAc + 1mL 10x TE + 8mL 50% PEG)
    • I've seen protocols use different molecular weights of PEG. 3000-4000 seems pretty common
  • Salmon sperm DNA ('SSD', 10 ug/uL, stored at -20C)
  • Plasmid DNA

Procedure

Day 0

Grow an overnight culture of your chosen yeast strain in appropriate media

Day 1

  1. In the morning, dilute overnight culture 1:100 (~OD 0.1) into fresh media. Use 5mL fresh media per transformation.
  2. Grow the culture to OD 0.4-0.8 (3.5-4.5 hr)
    • If you're transforming a plasmid, you don't need high efficiency. Just pull the culture whenever it's convenient.
  3. Prepare your solutions - put the water, LiAc/TE, and 40% PEG on ice. Thaw the SSD, make an aliquot into a PCR tube, incubate it at 95C for ~5 minutes, then chill on ice.
  4. Pellet cells at 6000g for 5 minutes at 4C. Resuspend in 2mL sterile water per transformation (so 10mL water for 5 transformations).
  5. Repellet. Resuspend in 200uL sterile water per transformation.
  6. Repellet. Resuspend in 200uL LiAc/TE per transformation.
  7. Repellet. Resuspend in 50uL LiAc/TE per transformation. Add 5uL SSD per transformation. Aliquot into chilled eppendorf tubes, 55uL per tube.
  8. Add DNA to each tube. 1uL of a prep is usually more than necessary.
  9. Add 300uL 40% PEG to each tube. Pipet to resuspend (shouldn't see any streaks after resuspension)
  10. Incubate in the spinner at 30C for 30 minutes (~2hr if using his3/his5)
  11. Heat shock in 42C water bath for 15 minutes
  12. Spin down, remove PEG
  13. If using G418, resuspend in 1mL YPD, incubate at 30C for ~2hr, then repellet
  14. Resuspend in 100uL sterile water, plate on appropriate dropout plates

Day 3

Colonies should be ready. Some strains/plasmids may take an extra day.

Notes