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'''Some Recent Publications'''
'''Selected Recent Publications'''


1. Filenko, N., Spiro, S., Browning, D., Squire, D., Overton, T., Cole, J. and Constantinidou, C. (2007) The NsrR regulon of Escherichia coli K12 includes genes encoding the hybrid cluster protein and the respiratory nitrite reductase.  Journal of Bacteriology  In press. [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=17449618&query_hl=1&itool=pubmed_docsum]
----
*Spiro, S. (2011) Another target for NO. Cell Host and Microbe 10:1-2 [http://www.ncbi.nlm.nih.gov/pubmed/21767805]


2. Spiro, S. (2007) Regulators of bacterial responses to nitric oxide.  FEMS Microbiology Reviews  31: 193-211.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=17313521&query_hl=1&itool=pubmed_docsum]
*Wang, Y.L., Dunn, A.K., Wilneff, J., McFall-Ngai, M.J., Spiro S. and Ruby, E.G. (2010) Vibrio fischeri flavohaemoglobin protects against nitric oxide during initiation of the squid-Vibrio symbiosis.  Molecular Microbiology 78:903-915 [http://www.ncbi.nlm.nih.gov/pubmed/20815823]


3. Ryan, R.P., Fouhy, Y., Lucey, J.F., Crossman, L.C. Spiro, S., He, Y-W., Zhang, L-H., Heeb, S., Cámara, M., Williams, P. and Dow, J.M. (2006) Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover.  Proceedings of the National Academy of Sciences USA 103: 6712-6717.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16611728&query_hl=1&itool=pubmed_docsum]
*Browning, D.F., Lee, D.J., Spiro, S. and Busby, S.J. (2010) Down-regulation of the Escherichia coli K-12 nrf promoter by binding of the NsrR nitric oxide-sensing transcription repressor to an upstream site.  Journal of Bacteriology 192:3824-3828 [http://www.ncbi.nlm.nih.gov/pubmed/20472787]


4. Lee, Y-Y., Shearer, N. and Spiro, S. (2006) Transcription factor NNR from Paracoccus denitrificans is a sensor of both nitric oxide and oxygen: isolation of nnr* alleles encoding effector-independent proteins and evidence for a haem-based sensing mechanism.  Microbiology 152: 1461-1470.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16622062&query_hl=1&itool=pubmed_docsum]
*Spiro, S. (2010) An alternative route to nitric oxide resistance.  Molecular Microbiology 77:6-10. [http://www3.interscience.wiley.com/journal/123417004/abstract]


5. Bodenmiller, D.M. and Spiro, S. (2006) The yjeB (nsrR) gene of Escherichia coli encodes a nitric oxide sensitive regulator of transcription.  Journal of Bacteriology 188: 874-881.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16428390&query_hl=1&itool=pubmed_docsum]
*Partridge, J.D., Bodenmiller, D.M., Humphrys, M.S. and Spiro, S. (2009) NsrR targets in the Escherichia coli genome: new insights into DNA sequence requirements for binding and a role for NsrR in the regulation of motility.  Molecular Microbiology 73:680-694. [http://www3.interscience.wiley.com/journal/122522927/abstract]


6. D’Autréaux, B., Tucker, N.P., Dixon, R. and Spiro, S. (2005) A non-haem iron centre in the transcription factor NorR senses nitric oxide.  Nature 437: 769-772.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16193057&query_hl=1&itool=pubmed_docsum]
*Rankin, L.D., Bodenmiller, D.M., Partridge, J.D., Nishino, S.F., Spain, J.C. and Spiro, S. (2008) Escherichia coli NsrR regulates a pathway for the oxidation of 3-nitrotyramine to 4-hydroxy-3-nitrophenylacetate.  Journal of Bacteriology 190: 6170-6177. [http://www.ncbi.nlm.nih.gov/pubmed/18658270?ordinalpos=5&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum]


7. Tucker, N.P., D’Autréaux, B., Studholme, D.J., Spiro, S. and Dixon, R. (2004) DNA binding activity of the Escherichia coli nitric oxide sensor NorR suggests a conserved target sequence in diverse proteobacteria. Journal of Bacteriology 186: 6656-6660.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15375149&query_hl=1&itool=pubmed_DocSum]
*Spiro, S. (2008) Metalloregulatory proteins and nitric oxide signalling in bacteria. Biochemical Society Transactions  36: 1160-1164. [http://www.ncbi.nlm.nih.gov/pubmed/19021516?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum]


8. Hutchings, M.I., Mandhana, N. and Spiro, S. (2002) The NorR protein of Escherichia coli activates expression of the flavorubredoxin gene norV in response to reactive nitrogen species. Journal of Bacteriology 184: 4640-4643.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=12142437&query_hl=1&itool=pubmed_DocSum]
*Efromovich, S., Grainger, D., Bodenmiller, D. and Spiro, S. (2008) Genome-wide identification of binding sites for the nitric oxide-sensitive transcriptional regulator NsrR. Methods in Enzymology 437: 211-233. [http://www.ncbi.nlm.nih.gov/pubmed/18433631?ordinalpos=2&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum]
 
*Mills, P.C., Rowley, G., Spiro, S., Hinton, J.C.D. and Richardson, D.J. (2008) A combination of cytochrome c nitrite reductase (NrfA) and flavorubredoxin (NorV) protects Salmonella enterica serovar Typhimurium against killing by NO in anoxic environments. Microbiology 154: 1218-1228.[http://www.ncbi.nlm.nih.gov/pubmed/18375814?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum]
 
*Tucker, N.P., D’Autréaux, B., Yousafzai, F., Fairhurst, S., Spiro, S. and Dixon, R. (2008) Analysis of the nitric oxide-sensing non-heme iron center in the NorR regulatory protein.  Journal of Biological Chemistry 208: 908-918.[http://www.ncbi.nlm.nih.gov/pubmed/18003617?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum]
 
*Filenko, N., Spiro, S., Browning, D., Squire, D., Overton, T., Cole, J. and Constantinidou, C. (2007) The NsrR regulon of ''Escherichia coli'' K12 includes genes encoding the hybrid cluster protein and the respiratory nitrite reductase.  Journal of Bacteriology  189: 4410-4417. [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=17449618&query_hl=1&itool=pubmed_docsum]
 
*Spiro, S. (2007) Regulators of bacterial responses to nitric oxide.  FEMS Microbiology Reviews  31: 193-211.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=17313521&query_hl=1&itool=pubmed_docsum]
 
*Ryan, R.P., Fouhy, Y., Lucey, J.F., Crossman, L.C. Spiro, S., He, Y-W., Zhang, L-H., Heeb, S., Cámara, M., Williams, P. and Dow, J.M. (2006) Cell-cell signaling in ''Xanthomonas campestris'' involves an HD-GYP domain protein that functions in cyclic di-GMP turnover.  Proceedings of the National Academy of Sciences USA 103: 6712-6717.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16611728&query_hl=1&itool=pubmed_docsum]
 
*Lee, Y-Y., Shearer, N. and Spiro, S. (2006) Transcription factor NNR from ''Paracoccus denitrificans'' is a sensor of both nitric oxide and oxygen: isolation of ''nnr''* alleles encoding effector-independent proteins and evidence for a haem-based sensing mechanism.  Microbiology 152: 1461-1470.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16622062&query_hl=1&itool=pubmed_docsum]
 
*Bodenmiller, D.M. and Spiro, S. (2006) The ''yjeB'' (''nsrR'') gene of ''Escherichia coli'' encodes a nitric oxide sensitive regulator of transcription.  Journal of Bacteriology 188: 874-881.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16428390&query_hl=1&itool=pubmed_docsum]  [http://www.f1000biology.com/article/id/1009336/evaluation F1000 Recommended]
 
*D’Autréaux, B., Tucker, N.P., Dixon, R. and Spiro, S. (2005) A non-haem iron centre in the transcription factor NorR senses nitric oxide.  Nature 437: 769-772.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16193057&query_hl=1&itool=pubmed_docsum]  [http://www.f1000biology.com/article/id/1028256/evaluation F1000 Must Read]
 
*Tucker, N.P., D’Autréaux, B., Studholme, D.J., Spiro, S. and Dixon, R. (2004) DNA binding activity of the ''Escherichia coli'' nitric oxide sensor NorR suggests a conserved target sequence in diverse proteobacteria. Journal of Bacteriology 186: 6656-6660.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15375149&query_hl=1&itool=pubmed_DocSum]
 
*Hutchings, M.I., Mandhana, N. and Spiro, S. (2002) The NorR protein of ''Escherichia coli'' activates expression of the flavorubredoxin gene norV in response to reactive nitrogen species. Journal of Bacteriology 184: 4640-4643.[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=12142437&query_hl=1&itool=pubmed_DocSum]

Latest revision as of 11:18, 10 August 2011

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Selected Recent Publications

  • Spiro, S. (2011) Another target for NO. Cell Host and Microbe 10:1-2 [1]
  • Wang, Y.L., Dunn, A.K., Wilneff, J., McFall-Ngai, M.J., Spiro S. and Ruby, E.G. (2010) Vibrio fischeri flavohaemoglobin protects against nitric oxide during initiation of the squid-Vibrio symbiosis. Molecular Microbiology 78:903-915 [2]
  • Browning, D.F., Lee, D.J., Spiro, S. and Busby, S.J. (2010) Down-regulation of the Escherichia coli K-12 nrf promoter by binding of the NsrR nitric oxide-sensing transcription repressor to an upstream site. Journal of Bacteriology 192:3824-3828 [3]
  • Spiro, S. (2010) An alternative route to nitric oxide resistance. Molecular Microbiology 77:6-10. [4]
  • Partridge, J.D., Bodenmiller, D.M., Humphrys, M.S. and Spiro, S. (2009) NsrR targets in the Escherichia coli genome: new insights into DNA sequence requirements for binding and a role for NsrR in the regulation of motility. Molecular Microbiology 73:680-694. [5]
  • Rankin, L.D., Bodenmiller, D.M., Partridge, J.D., Nishino, S.F., Spain, J.C. and Spiro, S. (2008) Escherichia coli NsrR regulates a pathway for the oxidation of 3-nitrotyramine to 4-hydroxy-3-nitrophenylacetate. Journal of Bacteriology 190: 6170-6177. [6]
  • Spiro, S. (2008) Metalloregulatory proteins and nitric oxide signalling in bacteria. Biochemical Society Transactions 36: 1160-1164. [7]
  • Efromovich, S., Grainger, D., Bodenmiller, D. and Spiro, S. (2008) Genome-wide identification of binding sites for the nitric oxide-sensitive transcriptional regulator NsrR. Methods in Enzymology 437: 211-233. [8]
  • Mills, P.C., Rowley, G., Spiro, S., Hinton, J.C.D. and Richardson, D.J. (2008) A combination of cytochrome c nitrite reductase (NrfA) and flavorubredoxin (NorV) protects Salmonella enterica serovar Typhimurium against killing by NO in anoxic environments. Microbiology 154: 1218-1228.[9]
  • Tucker, N.P., D’Autréaux, B., Yousafzai, F., Fairhurst, S., Spiro, S. and Dixon, R. (2008) Analysis of the nitric oxide-sensing non-heme iron center in the NorR regulatory protein. Journal of Biological Chemistry 208: 908-918.[10]
  • Filenko, N., Spiro, S., Browning, D., Squire, D., Overton, T., Cole, J. and Constantinidou, C. (2007) The NsrR regulon of Escherichia coli K12 includes genes encoding the hybrid cluster protein and the respiratory nitrite reductase. Journal of Bacteriology 189: 4410-4417. [11]
  • Spiro, S. (2007) Regulators of bacterial responses to nitric oxide. FEMS Microbiology Reviews 31: 193-211.[12]
  • Ryan, R.P., Fouhy, Y., Lucey, J.F., Crossman, L.C. Spiro, S., He, Y-W., Zhang, L-H., Heeb, S., Cámara, M., Williams, P. and Dow, J.M. (2006) Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover. Proceedings of the National Academy of Sciences USA 103: 6712-6717.[13]
  • Lee, Y-Y., Shearer, N. and Spiro, S. (2006) Transcription factor NNR from Paracoccus denitrificans is a sensor of both nitric oxide and oxygen: isolation of nnr* alleles encoding effector-independent proteins and evidence for a haem-based sensing mechanism. Microbiology 152: 1461-1470.[14]
  • Bodenmiller, D.M. and Spiro, S. (2006) The yjeB (nsrR) gene of Escherichia coli encodes a nitric oxide sensitive regulator of transcription. Journal of Bacteriology 188: 874-881.[15] F1000 Recommended
  • D’Autréaux, B., Tucker, N.P., Dixon, R. and Spiro, S. (2005) A non-haem iron centre in the transcription factor NorR senses nitric oxide. Nature 437: 769-772.[16] F1000 Must Read
  • Tucker, N.P., D’Autréaux, B., Studholme, D.J., Spiro, S. and Dixon, R. (2004) DNA binding activity of the Escherichia coli nitric oxide sensor NorR suggests a conserved target sequence in diverse proteobacteria. Journal of Bacteriology 186: 6656-6660.[17]
  • Hutchings, M.I., Mandhana, N. and Spiro, S. (2002) The NorR protein of Escherichia coli activates expression of the flavorubredoxin gene norV in response to reactive nitrogen species. Journal of Bacteriology 184: 4640-4643.[18]
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