Stanford/BIOE44: Schedule

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| Yes
| Yes
| [[Stanford/BIOE44:Module_1:Day6 | Arsenic!]]
| [[Stanford/BIOE44:Module_1:Day6 | Arsenic!]]
-
| <notes>
+
| Drew@blackboard w/ more on functional composition; [http://www.nature.com/nbt/journal/v26/n7/abs/nbt1413.html Research paper] showing how to indirectly measure PoPS (see the supplement)
|-
|-
-
| Device Design
+
| Device Engineering
| 8
| 8
| Thurs Apr 22  
| Thurs Apr 22  
| Yes
| Yes
-
| [[Stanford/BIOE44:Module_1:Day7 | Arsenic!!]]
+
| (work to build arsenic sensing construct)
-
| <notes>
+
| [[Media:BIOE44 2010 Day 7.pdf | Lecture notes (finding the PoPS boundaries)]]
|-
|-
-
| Device Design
+
| Device Design  
| 9
| 9
| Tues Apr 27  
| Tues Apr 27  
| Yes
| Yes
-
| What to measure, II?
+
| [[Stanford/BIOE44:Module_3:Day1 | What to measure?]]
-
| <notes>
+
| [[Media:BIOE44 2010 Day 8.pdf | Introduction to choosing a pollutant slides]]
|-
|-
-
| DNA Synthesis
+
| DNA Design
| 10
| 10
| Thurs Apr 29  
| Thurs Apr 29  
| Yes
| Yes
-
| Orders away!
+
| [[Stanford/BIOE44:Module_3:Day2 | Design your DNA]]
-
| <notes>
+
| [[Media:BIOE44 2010 Day 9.pdf | Lectures notes (DNA synthesis)]]
|-
|-
-
| Meanwhile...
+
| DNA Design & Order
| 11
| 11
| Tues May 4  
| Tues May 4  
| Yes
| Yes
-
| Moss essentials
+
| [[Stanford/BIOE44:Module_3:Day3 | Orders Away!]]
-
| <notes>
+
| (discussion of Joy/Kurweil & Sharp editorials)
|-
|-
| Meanwhile...
| Meanwhile...
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| Thurs May 6  
| Thurs May 6  
| Yes
| Yes
-
| Moss transformation
+
| [[Stanford/BIOE44:Module_4:Day1 | Moss and Arsenic]]
-
| <notes>
+
| (no lecture notes, introducing teams moss & arsenic)
|-
|-
| Meanwhile...
| Meanwhile...
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| Tues May 11  
| Tues May 11  
| Yes
| Yes
-
| Moss testing
+
| [[Stanford/BIOE44:Module_4:Day2 | Making ready!]](moss & arsenic teams)
-
| <notes>
+
| [[Media:BIOE44 2010 Day 12.pdf | Lectures notes (Property Rights)]]
|-
|-
| Meanwhile...
| Meanwhile...
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| Thurs May 13  
| Thurs May 13  
| Yes
| Yes
-
| Moss testing, II
+
| [[Stanford/BIOE44:Module_4:Day3 | Making ready!]] (moss & arsenic teams)
-
| <notes>
+
| (research paper presentations)
|-
|-
-
| Device Testing
+
| Baking...
| 15
| 15
| Tues May 18  
| Tues May 18  
| Yes
| Yes
-
| Assembly & preparations
+
| [[Stanford/BIOE44:Module_5:Day1| RBS design]]
-
| <notes>
+
| (ad hoc class)
|-
|-
-
| Device Testing
+
| Assembly & Testing, Day 1
| 16
| 16
| Thurs May 20  
| Thurs May 20  
| Yes
| Yes
-
| Testing day 1
+
| [[Stanford/BIOE44:Module_5:Day2| Project Building]]
-
| <notes>
+
| (in class discussion of today's Gibson et al. paper; [http://www.sciencemag.org/cgi/content/abstract/science.1190719 URL])
|-
|-
-
| Device Testing
+
| Assembly & Testing, Day 2
| 17
| 17
| Tues May 25
| Tues May 25
| Yes
| Yes
-
| Testing day 2
+
| [[Stanford/BIOE44:Module_5:Day3| Continue Building]]
| <notes>
| <notes>
|-
|-
-
| Analysis & Wrap-Up
+
| Assembly & Testing, Day 3
| 18
| 18
| Thurs May 27  
| Thurs May 27  
| Yes
| Yes
-
| Analysis & Wrap-Up
+
| Testing day 3
 +
| <notes>
 +
|-
 +
| Wrap up
 +
| 18
 +
| Tuesday June 1
 +
| Yes
 +
| Lab wrap up
| <notes>
| <notes>
|-
|-
|}
|}

Current revision

Home        People        Schedule        Key Info.        OWW Basics       
DNA Engineering        Devices        Synthesis        Baking        Testing

MODULE DAY DATE LECTURE? LAB Notes
Orientation 1 Tue Mar 30 No Lab essentials Lecture Notes
DNA Engineering 2 Thur Apr 1 Yes Mystery! Lecture Notes
DNA Engineering 3 Tues Apr 6 Yes Revealed Lecture Notes
DNA Engineering 4 Thurs Apr 8 Yes Ligate, ZAP!, plate Lecture Notes
DNA Engineering 5 Tues Apr 13 Yes Validation Kosh- & Isis-led discussion
Device Engineering 6 Thurs Apr 15 Yes Arsenic Drew@blackboard introducing functional composition; comic
Device Engineering 7 Tues Apr 20 Yes Arsenic! Drew@blackboard w/ more on functional composition; Research paper showing how to indirectly measure PoPS (see the supplement)
Device Engineering 8 Thurs Apr 22 Yes (work to build arsenic sensing construct) Lecture notes (finding the PoPS boundaries)
Device Design 9 Tues Apr 27 Yes What to measure? Introduction to choosing a pollutant slides
DNA Design 10 Thurs Apr 29 Yes Design your DNA Lectures notes (DNA synthesis)
DNA Design & Order 11 Tues May 4 Yes Orders Away! (discussion of Joy/Kurweil & Sharp editorials)
Meanwhile... 12 Thurs May 6 Yes Moss and Arsenic (no lecture notes, introducing teams moss & arsenic)
Meanwhile... 13 Tues May 11 Yes Making ready!(moss & arsenic teams) Lectures notes (Property Rights)
Meanwhile... 14 Thurs May 13 Yes Making ready! (moss & arsenic teams) (research paper presentations)
Baking... 15 Tues May 18 Yes RBS design (ad hoc class)
Assembly & Testing, Day 1 16 Thurs May 20 Yes Project Building (in class discussion of today's Gibson et al. paper; URL)
Assembly & Testing, Day 2 17 Tues May 25 Yes Continue Building <notes>
Assembly & Testing, Day 3 18 Thurs May 27 Yes Testing day 3 <notes>
Wrap up 18 Tuesday June 1 Yes Lab wrap up <notes>
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