Stephanopoulos:Projects - Revision history

Adrianfay at 22:30, 17 July 2007

Adrianfay — Tue, 17 Jul 2007 22:30:33 GMT

←Older revision		Revision as of 22:30, 17 July 2007
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	:* [[Stephanopoulos:gTME \| '''gTME''']]		:* [[Stephanopoulos:gTME \| '''gTME''']]

-	:* [[Stephanopoulos ~~Lab~~:Flux Determination \| '''Flux Determination''']]	+	:* [[Stephanopoulos:Flux Determination \| '''Flux Determination''']]

	:* [[Stephanopoulos:Hepatocyte Physiology \| '''Hepatocyte Physiology''']]		:* [[Stephanopoulos:Hepatocyte Physiology \| '''Hepatocyte Physiology''']]
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	methods, many of which have also become areas of research for our group:		methods, many of which have also become areas of research for our group:

-	:* [[Stephanopoulos ~~Lab~~:Bioinformatics and Systems Biology \| '''Bioinformatics and Systems Biology''']] - Our group was one of the first to realize the importance of computational tools for handling the large volume of data generated by microarrays and other technologies.	+	:* [[Stephanopoulos:Bioinformatics and Systems Biology \| '''Bioinformatics and Systems Biology''']] - Our group was one of the first to realize the importance of computational tools for handling the large volume of data generated by microarrays and other technologies.

	:* [[Stephanopoulos:Methods for intracellular flux determination \| '''Methods for intracellular flux determination''']] - Fluxes are determined by material balancing, NMR fine spectra analysis and GC-MS measurements.		:* [[Stephanopoulos:Methods for intracellular flux determination \| '''Methods for intracellular flux determination''']] - Fluxes are determined by material balancing, NMR fine spectra analysis and GC-MS measurements.

Adrianfay at 22:24, 17 July 2007

Adrianfay — Tue, 17 Jul 2007 22:24:19 GMT

Adrianfay at 22:38, 1 June 2007

Adrianfay — Fri, 01 Jun 2007 22:38:44 GMT

←Older revision		Revision as of 22:38, 1 June 2007
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	\|height=6px\|		\|height=6px\|
	\|-		\|-
-	\|style="padding:15px; background-color: #~~FFCCAA~~;"\|	+	\|style="padding:15px; background-color: #EED0BB;"\|
	= <font style="color:maroon">Research</font> =		= <font style="color:maroon">Research</font> =

	Our research is focused on Metabolic Engineering - the improvement of cellular properties, using modern genetic tools. This field encompasses two important components:		Our research is focused on Metabolic Engineering - the improvement of cellular properties, using modern genetic tools. This field encompasses two important components:

-	:* '''The modification of biochemical pathways inside cells''', and	+	# '''The modification of biochemical pathways inside cells''', and
-	:* '''The rigorous evaluation of the resulting cellular phenotypes.'''	+	# '''The rigorous evaluation of the resulting cellular phenotypes.'''


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	\|}		\|}
	{{Template:Stephanopoulos_bamel_middle}}		{{Template:Stephanopoulos_bamel_middle}}
-	~~{{Template:Stephanopoulos_bamel_bottom}}~~

Adrianfay at 06:51, 28 May 2007

Adrianfay — Mon, 28 May 2007 06:51:51 GMT

←Older revision		Revision as of 06:51, 28 May 2007
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	\|height=6px\|		\|height=6px\|
	\|-		\|-
-	\|style="~~border: 3px solid maroon;~~ padding:15px; background-color: #FFCCAA;"\|	+	\|style="padding:15px; background-color: #FFCCAA;"\|
	= <font style="color:maroon">Research</font> =		= <font style="color:maroon">Research</font> =

Adrianfay at 05:43, 28 May 2007

Adrianfay — Mon, 28 May 2007 05:43:06 GMT

←Older revision		Revision as of 05:43, 28 May 2007
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	__NOTOC__		__NOTOC__
-	{{~~Template:~~Stephanopoulos_bamel_top}}	+	{{Stephanopoulos_bamel_top}}
-		+	{\|cellspacing="0" cellpadding="0" border="0" style="width: 770px; color: #000000; background-color: #ffffff;"
-	{\| cellspacing="0" cellpadding="0" border="0" style="~~padding: 0px;~~ width: 770px; color: #000000; background-color: #ffffff;" \|- valign="top"	+	\|- valign="top"
-	\|width=~~770px~~ style="padding: ~~10px~~; background-color: #~~ffffff~~"\|	+	\|bgcolor="#FFEEDD" style="image" rowspan="3"\|{{Template:Stephanopoulos_bamel_left}}
-		+	\|width=6px rowspan="3" bgcolor="#FFEEDD"\| <!----6 pixle vertical space colored---->
-	=<font style="color:maroon">Research</font>=	+	\|width=7px rowspan="3"\| <!----7 pixle vertical white space ---->
		+	\|height=6px\|
		+	\|-
		+	\|style="border: 3px solid maroon; padding:15px; background-color: #FFCCAA;"\|
		+	= <font style="color:maroon">Research</font> =

	Our research is focused on Metabolic Engineering - the improvement of cellular properties, using modern genetic tools. This field encompasses two important components:		Our research is focused on Metabolic Engineering - the improvement of cellular properties, using modern genetic tools. This field encompasses two important components:

-	:* '''The modification of biochemical pathways inside cells''' and	+	:* '''The modification of biochemical pathways inside cells''', and
	:* '''The rigorous evaluation of the resulting cellular phenotypes.'''		:* '''The rigorous evaluation of the resulting cellular phenotypes.'''
		+

-
	Our most recent research has been focused on the following topics:		Our most recent research has been focused on the following topics:

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	\|}		\|}
-
	{{Template:Stephanopoulos_bamel_middle}}		{{Template:Stephanopoulos_bamel_middle}}
	{{Template:Stephanopoulos_bamel_bottom}}		{{Template:Stephanopoulos_bamel_bottom}}

Adrianfay at 16:53, 23 May 2007

Adrianfay — Wed, 23 May 2007 16:53:42 GMT

←Older revision		Revision as of 16:53, 23 May 2007
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	Our research is focused on Metabolic Engineering - the improvement of cellular properties, using modern genetic tools. This field encompasses two important components:		Our research is focused on Metabolic Engineering - the improvement of cellular properties, using modern genetic tools. This field encompasses two important components:

-	:* The modification of biochemical pathways inside cells and	+	:* '''The modification of biochemical pathways inside cells''' and
-	:* The rigorous evaluation of the resulting cellular phenotypes.	+	:* '''The rigorous evaluation of the resulting cellular phenotypes.'''


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	:* [[Stephanopoulos Lab:Metabolomics \| '''Metabolomics''']]		:* [[Stephanopoulos Lab:Metabolomics \| '''Metabolomics''']]

-	:* [[Stephanopoulos Lab:~~Systems Biology~~ \| '''~~Systems Biology~~''']]	+	:* [[Stephanopoulos Lab:Rational Drug Design \| '''Rational Drug Design''']]

		+	:* [[Stephanopoulos Lab:Systems Biology \| '''Systems Biology''']]

Adrianfay at 21:23, 22 May 2007

Adrianfay — Tue, 22 May 2007 21:23:23 GMT

←Older revision		Revision as of 21:23, 22 May 2007
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	__NOTOC__		__NOTOC__
-
	{{Template:Stephanopoulos_bamel_top}}		{{Template:Stephanopoulos_bamel_top}}

-	{\| cellspacing="0" cellpadding="0" border="0" style="padding: 0px; width: ~~740px~~; color: #000000; background-color: #ffffff;" \|- valign="top"	+	{\| cellspacing="0" cellpadding="0" border="0" style="padding: 0px; width: 770px; color: #000000; background-color: #ffffff;" \|- valign="top"
-	\|width=~~740px~~ style="padding: 10px; background-color: #ffffff"\|	+	\|width=770px style="padding: 10px; background-color: #ffffff"\|

	=<font style="color:maroon">Research</font>=		=<font style="color:maroon">Research</font>=

Adrianfay at 22:49, 21 May 2007

Adrianfay — Mon, 21 May 2007 22:49:04 GMT

←Older revision		Revision as of 22:49, 21 May 2007
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-	{\| cellspacing="0" cellpadding="0" border="0" style="padding: 0px; width: ~~750px~~; color: #000000; background-color: #ffffff;"	+	__NOTOC__
-	\|-valign="top"	+
-	~~<html>~~	+	{{Template:Stephanopoulos_bamel_top}}
-	~~<align~~=~~left>~~<h1 style="color:maroon">Research</~~h1></align>~~	+
-	~~</html~~>	+	{\| cellspacing="0" cellpadding="0" border="0" style="padding: 0px; width: 740px; color: #000000; background-color: #ffffff;" \|- valign="top"
		+	\|width=740px style="padding: 10px; background-color: #ffffff"\|
		+
		+	=<font style="color:maroon">Research</font>=

	Our research is focused on Metabolic Engineering - the improvement of cellular properties, using modern genetic tools. This field encompasses two important components:		Our research is focused on Metabolic Engineering - the improvement of cellular properties, using modern genetic tools. This field encompasses two important components:
-	* ~~the~~ modification of biochemical pathways inside cells and	+
-	* ~~the~~ rigorous evaluation of the resulting cellular phenotypes.	+	:* The modification of biochemical pathways inside cells and
-	~~<p>~~	+	:* The rigorous evaluation of the resulting cellular phenotypes.
		+

	Our most recent research has been focused on the following topics:		Our most recent research has been focused on the following topics:

-	* [[Stephanopoulos Lab:Production of biochemicals in E. coli \| '''Metabolic Engineering of <i>E.Coli</i> for the production of biochemicals''']]	+	:* [[Stephanopoulos Lab:Production of biochemicals in E. coli \| '''Metabolic Engineering of <i>E.Coli</i> for the production of biochemicals''']]
		+
		+	:* [[Stephanopoulos Lab:Inverse Metabolic Engineering \| '''Inverse Metabolic Engineering''']]
		+
		+	:* [[Stephanopoulos Lab:gTME \| '''gTME''']]
		+
		+	:* [[Stephanopoulos Lab:Flux Determination \| '''Flux Determination''']]
		+
		+	:* [[Stephanopoulos Lab:Hepatocyte Physiology \| '''Hepatocyte Physiology''']]
		+
		+	:* [[Stephanopoulos Lab:Metabolomics \| '''Metabolomics''']]
		+
		+	:* [[Stephanopoulos Lab:Systems Biology \| '''Systems Biology''']]

-	* [[Stephanopoulos Lab:Inverse Metabolic Engineering \| '''Inverse Metabolic Engineering''']]

-	* [[Stephanopoulos Lab:gTME \| '''gTME''']]

-	* [[Stephanopoulos Lab:~~Flux Determination \| '''Flux Determination''']]~~	+	To accomplish the above goals we make use of a diverse array of scientific tools and
		+	methods, many of which have also become areas of research for our group:

-	* [[Stephanopoulos Lab:~~Hepatocyte Physiology~~ \| '''~~Hepatocyte Physiology~~''']]	+	:* [[Stephanopoulos Lab:Bioinformatics and Systems Biology \| '''Bioinformatics and Systems Biology''']] - Our group was one of the first to realize the importance of computational tools for handling the large volume of data generated by microarrays and other technologies.

-	* [[Stephanopoulos Lab:~~Metabolomics~~ \| '''~~Metabolomics~~''']]	+	:* [[Stephanopoulos Lab:Methods for intracellular flux determination \| '''Methods for intracellular flux determination''']] - Fluxes are determined by material balancing, NMR fine spectra analysis and GC-MS measurements.

-	* [[Stephanopoulos Lab:~~Systems Biology~~ \| '''~~Systems Biology~~''']]	+	:* [[Stephanopoulos Lab:DNA microarrays \| '''DNA microarrays''']] - We have developed full genome microarrays for ''Synechocystis'' Sp., and partial microarrays for ''C. glutamicum'', ''E. coli'', and the mouse genomes.

-	~~<html>~~	+	:* [[Stephanopoulos Lab:Bioreaction network analysis \| '''Bioreaction network analysis''']]
-	~~<br>~~	+
-	~~To accomplish the above goals we make use of a diverse array of scientific tools and~~	+
-	~~methods, many of which have also become areas of research for our group~~:	+
-	~~<ul>~~	+
-	~~<p>~~	+
-	~~<li>~~	+
-	~~<b><a href="Bioinfo.shtml">Bioinformatics and Systems Biology</a></b> - Our group was~~	+
-	~~one of the first to realize the importance of computational tools for handling the~~	+
-	~~large volume of data generated by microarrays and other technologies.~~	+
-	~~<li>~~	+
-	~~<b><a href="Fluxes.shtml">Methods for intracellular flux determination</a></b>~~	+
-	~~- Fluxes are determined by material balancing, NMR fine spectra~~ analysis ~~and~~	+
-	~~GC-MS measurements.~~	+
-	~~<li>~~	+
-	~~<b><a href="Microarray.shtml">DNA microarrays</a></b> - We have developed full~~	+
-	~~genome microarrays for <i>Synechocystis</i> Sp., and partial microarrays for~~	+
-	~~<i>C. glutamicum</i>, <i>E. coli</i>, and the mouse genomes.~~	+
-	~~<li>~~	+
-	~~<b><a href="BioReactor.shtml">~~Bioreaction network analysis~~.</a></b>~~	+
-	~~<br>~~	+

-	~~</html>~~	+	\|}
-	~~<html>~~	+
-	~~<tr><td><br></td></tr> <!---Blank Line---->~~	+
-	~~<div style="position: relative; width: 750px; height: 20px; overflow: hidden">~~	+
-	~~<div style="position: absolute; top: 0px; left: 0px; z-index: 2">~~	+
-	~~<img src="/images/6/69/Ban_2_dsm.gif" alt="" width="750" height="20" longdesc="/wiki/Image:Ban_2_dsm.gif"/>~~	+
-	~~</a></div>~~	+
-	~~</div> <!---Maroon bar--->~~	+
-	~~</html>~~	+
-	~~----~~	+
-	~~<html>~~	+

-	~~<tr><td width=750 valign="top"> <!---Footer Info Table---->~~	+	{{Template:Stephanopoulos_bamel_middle}}
-	~~<table width=750 border=0 cellpadding=0 cellspacing=0>~~	+	{{Template:Stephanopoulos_bamel_bottom}}
-	~~<tr><td align="left" width="250" valign="top">~~	+
-	~~<font color="maroon"><tt>Address</tt></font><br>~~	+
-	~~<small>~~	+
-	~~Massachusetts Institute of Technology<br>~~	+
-	~~Department of Chemical Engineering<br>~~	+
-	~~Cambridge, MA 02139<br>~~	+
-	~~Room 56-469~~	+
-	~~</small>~~	+
-	~~</td>~~	+
-	~~<td align="center" width="250" valign="top">~~	+
-	~~<small>~~	+
-	~~<a href="http~~:~~//www.mit.edu">MIT</a> \| <a href="/wiki/Stephanopoulos_Lab">HOME</a><br>~~	+
-	~~Last Modified~~:~~<br>Monday, July 10th, 2006 - by <a href="Adrian.shtml">afi</a>.~~	+
-	~~</small>~~	+
-	~~<br>~~	+
-	~~<font color="#990000"><tt>gnswebpage-www@mit.edu</tt></font>~~	+
-	~~</td>~~	+
-	~~<td align="right" width="250" valign="top">~~	+
-	~~<font color="#990000"><tt>Telephones</tt><br></font>~~	+
-	~~<small>~~	+
-	~~office \| 617.258.0398<br>~~	+
-	~~lab \| 617.253.6591<br>~~	+
-	~~lab \| 617.258.0349<br>~~	+
-	~~lab \| 617.253.6521<br>~~	+
-	~~fax \| 617.253.3122<br>~~	+
-	~~</small>~~	+
-	~~</td></tr>~~	+
-	~~</table></td></tr>~~	+
-	~~</html>~~	+

Curt at 23:04, 12 July 2006

Curt — Wed, 12 Jul 2006 23:04:28 GMT

←Older revision		Revision as of 23:04, 12 July 2006
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	* the rigorous evaluation of the resulting cellular phenotypes.		* the rigorous evaluation of the resulting cellular phenotypes.
	<p>		<p>
-	~~<p>~~

	Our most recent research has been focused on the following topics:		Our most recent research has been focused on the following topics:

Curt at 23:04, 12 July 2006

Curt — Wed, 12 Jul 2006 23:04:19 GMT

←Older revision		Revision as of 23:04, 12 July 2006
Line 8:		Line 8:
	* the modification of biochemical pathways inside cells and		* the modification of biochemical pathways inside cells and
	* the rigorous evaluation of the resulting cellular phenotypes.		* the rigorous evaluation of the resulting cellular phenotypes.
-	<p><p>	+	<p>
		+	<p>

	Our most recent research has been focused on the following topics:		Our most recent research has been focused on the following topics:

←Older revision		Revision as of 22:30, 17 July 2007
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	:* [[Stephanopoulos:gTME \| '''gTME''']]		:* [[Stephanopoulos:gTME \| '''gTME''']]

-	:* [[Stephanopoulos ~~Lab~~:Flux Determination \| '''Flux Determination''']]	+	:* [[Stephanopoulos:Flux Determination \| '''Flux Determination''']]

	:* [[Stephanopoulos:Hepatocyte Physiology \| '''Hepatocyte Physiology''']]		:* [[Stephanopoulos:Hepatocyte Physiology \| '''Hepatocyte Physiology''']]
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	methods, many of which have also become areas of research for our group:		methods, many of which have also become areas of research for our group:

-	:* [[Stephanopoulos ~~Lab~~:Bioinformatics and Systems Biology \| '''Bioinformatics and Systems Biology''']] - Our group was one of the first to realize the importance of computational tools for handling the large volume of data generated by microarrays and other technologies.	+	:* [[Stephanopoulos:Bioinformatics and Systems Biology \| '''Bioinformatics and Systems Biology''']] - Our group was one of the first to realize the importance of computational tools for handling the large volume of data generated by microarrays and other technologies.

	:* [[Stephanopoulos:Methods for intracellular flux determination \| '''Methods for intracellular flux determination''']] - Fluxes are determined by material balancing, NMR fine spectra analysis and GC-MS measurements.		:* [[Stephanopoulos:Methods for intracellular flux determination \| '''Methods for intracellular flux determination''']] - Fluxes are determined by material balancing, NMR fine spectra analysis and GC-MS measurements.

←Older revision		Revision as of 22:24, 17 July 2007
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	Our most recent research has been focused on the following topics:		Our most recent research has been focused on the following topics:

-	:* [[Stephanopoulos ~~Lab~~:Production of biochemicals in E. coli \| '''Metabolic Engineering of <i>E.Coli</i> for the production of biochemicals''']]	+	:* [[Stephanopoulos:Production of biochemicals in E. coli \| '''Metabolic Engineering of <i>E.Coli</i> for the production of biochemicals''']]

-	:* [[Stephanopoulos ~~Lab~~:Inverse Metabolic Engineering \| '''Inverse Metabolic Engineering''']]	+	:* [[Stephanopoulos:Inverse Metabolic Engineering \| '''Inverse Metabolic Engineering''']]

-	:* [[Stephanopoulos ~~Lab~~:gTME \| '''gTME''']]	+	:* [[Stephanopoulos:gTME \| '''gTME''']]

	:* [[Stephanopoulos Lab:Flux Determination \| '''Flux Determination''']]		:* [[Stephanopoulos Lab:Flux Determination \| '''Flux Determination''']]

-	:* [[Stephanopoulos ~~Lab~~:Hepatocyte Physiology \| '''Hepatocyte Physiology''']]	+	:* [[Stephanopoulos:Hepatocyte Physiology \| '''Hepatocyte Physiology''']]

-	:* [[Stephanopoulos ~~Lab~~:Metabolomics \| '''Metabolomics''']]	+	:* [[Stephanopoulos:Metabolomics \| '''Metabolomics''']]

-	:* [[Stephanopoulos ~~Lab~~:Rational Drug Design \| '''Rational Drug Design''']]	+	:* [[Stephanopoulos:Rational Drug Design \| '''Rational Drug Design''']]

-	:* [[Stephanopoulos ~~Lab~~:Systems Biology \| '''Systems Biology''']]	+	:* [[Stephanopoulos:Systems Biology \| '''Systems Biology''']]


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	:* [[Stephanopoulos Lab:Bioinformatics and Systems Biology \| '''Bioinformatics and Systems Biology''']] - Our group was one of the first to realize the importance of computational tools for handling the large volume of data generated by microarrays and other technologies.		:* [[Stephanopoulos Lab:Bioinformatics and Systems Biology \| '''Bioinformatics and Systems Biology''']] - Our group was one of the first to realize the importance of computational tools for handling the large volume of data generated by microarrays and other technologies.

-	:* [[Stephanopoulos ~~Lab~~:Methods for intracellular flux determination \| '''Methods for intracellular flux determination''']] - Fluxes are determined by material balancing, NMR fine spectra analysis and GC-MS measurements.	+	:* [[Stephanopoulos:Methods for intracellular flux determination \| '''Methods for intracellular flux determination''']] - Fluxes are determined by material balancing, NMR fine spectra analysis and GC-MS measurements.

-	:* [[Stephanopoulos ~~Lab~~:DNA microarrays \| '''DNA microarrays''']] - We have developed full genome microarrays for ''Synechocystis'' Sp., and partial microarrays for ''C. glutamicum'', ''E. coli'', and the mouse genomes.	+	:* [[Stephanopoulos:DNA microarrays \| '''DNA microarrays''']] - We have developed full genome microarrays for ''Synechocystis'' Sp., and partial microarrays for ''C. glutamicum'', ''E. coli'', and the mouse genomes.

-	:* [[Stephanopoulos ~~Lab~~:Bioreaction network analysis \| '''Bioreaction network analysis''']]	+	:* [[Stephanopoulos:Bioreaction network analysis \| '''Bioreaction network analysis''']]

	\|}		\|}
	{{Template:Stephanopoulos_bamel_middle}}		{{Template:Stephanopoulos_bamel_middle}}