Synthetic Biology:BioBricks

From OpenWetWare

(Difference between revisions)
Jump to: navigation, search
(Standard Part Definition)
Current revision (12:14, 4 October 2007) (view source)
(Information)
 
(20 intermediate revisions not shown.)
Line 1: Line 1:
-
Stub for BioBricks information. Much more info should be added about the actual BioBricks protocols/standards.
+
{{Synthetic biology top}}
 +
<div style="padding: 10px; width: 730px; color: #000000; background-color: #ccccff">
-
== Standard Part Definition ==
+
'''This is a portal for information relating to the [http://parts.mit.edu Registry of Standard Biological Parts]. Please add any information relevant to BioBricks protocols and standards.'''
-
* I actually have some issues with how the 'standard' should be defined. In particular, there are lots of BioBricks-compatible parts with different filler sequences. For example, does removing the NotI sites make something a non-BioBricks part? The extra bases inserted after XbaI and before SpeI, do we consider that part of the standard? I have had times when I wanted to remove or change the bases in there for some reason.  [[User:Austin|Austin]] 19:24, 18 Sep 2005 (EDT)
+
==Introduction==
-
* The ends of the bricks have nothing to do with making something a BioBrick.  E.g., if you take for granted the idea that we are moving towards synthesis-based "standard assembly" then everything might quickly become scarless.  So, it may be worth considering a Bricks standard and then a linker standard.  Standard Assembly version 1 is one linker standard.  Meanwhile, the standard Brick is more about the set of information needed to define that part's function in some useful way (e.g., so that it can used reliably in combination). [[User:Endy|Endy]] 11:34, 19 Sep 2005 (EDT)
+
-
== Protocols ==
+
The Registry of Standard Biological Parts is a collection of parts: sequences of DNA with specific function that can be combined together to implement more complex functions.  These parts are called BioBricks.
 +
 
 +
==Protocols==
 +
*[[BioBricks construction tutorial]]
 +
*[[Synthetic Biology:BioBricks/3A assembly | 3A assembly]]
 +
*[[Synthetic Biology:BioBricks/Part fabrication | Part fabrication]]
 +
*[[Silver: BB Strategy | Silver lab strategy]]
 +
*[[Synthetic Biology:BioBricks/Standard FACS protocol]]
 +
 
 +
==Information==
 +
*[[Synthetic Biology:Vectors | Vectors]]
 +
*[[Synthetic Biology:Semantic web ontology | Ontology]]
 +
*[[Synthetic Biology:BioBricks/Naming a new biological part | How to name a new BioBrick]]
 +
*[[Synthetic Biology:BioBricks/Standardization | Standards of practice for engineered biological systems]]
 +
*[[PoPS]] and [[RiPS]]
 +
 
 +
==Projects==
 +
*[[Barcodes]]
 +
*[[Receiver Definition | Device datasheet example]]
 +
*[[Synthetic Biology:Vectors/Single copy plasmid | Single copy vectors]]
 +
*[[Standard E. coli Strain for BioBricks]]
 +
*[[Standardized GFP quantification]]
 +
 
 +
==Discussions==
 +
*[[Synthetic Biology:Abstraction hierarchy | Abstraction hierarchy]]
 +
*[[Parts characterization]]
 +
*[[Synthetic Biology:BioBricks/mRNA design rules|mRNA design rules]]
 +
*[[Registry of Standard Biological Parts | Registry of Standard Biological Parts on OpenWetWare]]
 +
 
 +
==Questions==
 +
'''Anyone with questions re BioBricks or BioBricks assembly can email <code>biobricks AT openwetware DOT org</code>.'''
 +
 
 +
'''If you want to join the help/discussion list, [[List:Biobricks|add yourself to the mailing list]].'''
 +
 
 +
</div>
 +
{{Synthetic biology bottom}}

Current revision

Home        About        Conferences        Labs        Courses        Resources        FAQ       

This is a portal for information relating to the Registry of Standard Biological Parts. Please add any information relevant to BioBricks protocols and standards.

Introduction

The Registry of Standard Biological Parts is a collection of parts: sequences of DNA with specific function that can be combined together to implement more complex functions. These parts are called BioBricks.

Protocols

Information

Projects

Discussions

Questions

Anyone with questions re BioBricks or BioBricks assembly can email biobricks AT openwetware DOT org.

If you want to join the help/discussion list, add yourself to the mailing list.

This site is hosted on OpenWetWare and can be edited by all members of the Synthetic Biology community.
Making life better, one part at a time.


Personal tools