Synthetic Biology:Documents: Difference between revisions

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<h3>Papers</h3>
===Papers===
*[http://www.nature.com/msb/journal/v1/n1/full/msb4100025.html Refactoring bacteriophage T7] by [[Leon Chan]], [[Sriram Kosuri]] and [[Drew Endy]] with commentary [http://www.nature.com/msb/journal/v1/n1/full/msb4100028.html Engineering novel life] by [[Tom Knight]]
*[http://www.nature.com/msb/journal/v1/n1/full/msb4100025.html Refactoring bacteriophage T7] by [[Leon Chan]], [[Sriram Kosuri]] and [[Drew Endy]] with commentary [http://www.nature.com/msb/journal/v1/n1/full/msb4100028.html Engineering novel life] by [[Tom Knight]]


<h3>Theses</h3>
===Theses===
*[http://hdl.handle.net/1721.1/7115 BioJADE: A Design and Simulation Tool for Synthetic Biological Systems] by Jonathan Goler
*[http://hdl.handle.net/1721.1/7115 BioJADE: A Design and Simulation Tool for Synthetic Biological Systems] by Jonathan Goler
*[http://hdl.handle.net/1721.1/16618 Fluorescence assay for polymerase arrival rates] by [[Austin Che]]
*[http://hdl.handle.net/1721.1/16618 Fluorescence assay for polymerase arrival rates] by [[Austin Che]]


<h3>Technical Reports</h3>
===Technical Reports===
*[http://hdl.handle.net/1721.1/21168 Idempotent Vector Design for Standard Assembly of BioBricks] by [[Tom Knight]]
*[http://hdl.handle.net/1721.1/21168 Idempotent Vector Design for Standard Assembly of BioBricks] by [[Tom Knight]]
*[http://hdl.handle.net/1721.1/21167 DARPA BioComp Plasmid Distribution 1.00 of Standard Biobrick Components] by [[Tom Knight]]
*[http://hdl.handle.net/1721.1/21167 DARPA BioComp Plasmid Distribution 1.00 of Standard Biobrick Components] by [[Tom Knight]]
*[http://austin.che.name/docs/bbpp.pdf BioBricks++: Simplifying Assembly of Standard DNA Components] by [[Austin Che]]
*[http://austin.che.name/docs/bbpp.pdf BioBricks++: Simplifying Assembly of Standard DNA Components] by [[Austin Che]]


<h3>Presentations</h3>
===Presentations===
*[http://austin.che.name/docs/dangerous_ideas.pdf The Next Step in Bioevolution: Engineering the Microbial World] by [[Austin Che]]
*[http://austin.che.name/docs/dangerous_ideas.pdf The Next Step in Bioevolution: Engineering the Microbial World] by [[Austin Che]]
*A set of [http://web.mit.edu/endy/www/scraps/talks/ presentation slides] from various talks by [[Drew Endy]], many of which focus on the engineering of biology.
*A set of [http://web.mit.edu/endy/www/scraps/talks/ presentation slides] from various talks by [[Drew Endy]], many of which focus on the engineering of biology.


<h3>Thesis Proposals</h3>
===Thesis Proposals===
*[http://hdl.handle.net/1721.1/19813 Engineering the Interface Between Cellular Chassis and Integrated Biological Systems] by [[Barry Canton]]
*[http://hdl.handle.net/1721.1/19813 Engineering the Interface Between Cellular Chassis and Integrated Biological Systems] by [[Barry Canton]]
*[http://hdl.handle.net/1721.1/21169 Design and Evolution of Engineered Biological Systems] by [[Jason Kelly]]
*[http://hdl.handle.net/1721.1/21169 Design and Evolution of Engineered Biological Systems] by [[Jason Kelly]]


<h3>Posters</h3>
===Posters===
*[http://austin.che.name/docs/bbpp_poster.pdf BioBricks++: Mindless Module Manipulation by Monkeys] by [[Austin Che]]
*[http://austin.che.name/docs/bbpp_poster.pdf BioBricks++: Mindless Module Manipulation by Monkeys] by [[Austin Che]]
*[[Image:BCwisconsin05.pdf|Engineering the Interface Between Cellular Chassis and Integrated Biological Systems]] by [[Barry Canton]]
*[[Image:BCwisconsin05.pdf|Engineering the Interface Between Cellular Chassis and Integrated Biological Systems]] by [[Barry Canton]]


<h3>Working Drafts</h3>
===Working Drafts===
*Draft 1: [http://docs.syntheticbiology.org/LacOperator.doc Regulatory Schemes in Biological Networks to Produce Desired Response and Stability.  The genetic inverter: A computational case study]
*Draft 1: [http://docs.syntheticbiology.org/LacOperator.doc Regulatory Schemes in Biological Networks to Produce Desired Response and Stability.  The genetic inverter: A computational case study]
*Draft 2: [http://docs.syntheticbiology.org/HomologRecomb.pdf Recombineering: Homologous Recombination-Mediated DNA Engineering in E. coli]
*Draft 2: [http://docs.syntheticbiology.org/HomologRecomb.pdf Recombineering: Homologous Recombination-Mediated DNA Engineering in E. coli]
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Revision as of 13:37, 14 September 2005

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