Synthetic Biology:ToolsWishlist

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This is a quick dump. I will pretty it up soon.
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From the beginning tools should be designed as a usable [http://en.wikipedia.org/wiki/Integrated_development_environment IDE] (Integrated Development Environment) like Eclipse or NetBeans. Should be accessible to users with a variety of backgrounds. Tools (or subtools) should work together, seamlessly sharing a common representation for parts, devices, systems, and strains. New functionality should be easy to add via a plug-in interface, and should be able to take advantage of a common framework for displaying and manipulating DNA sequences, parts, devices, systems, and strains.
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==Specific tools==
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===Project management tool===
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===Design tool===
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===Assembly tool===
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===Simulation tool===

Revision as of 19:47, 16 January 2008

This is a quick dump. I will pretty it up soon.


From the beginning tools should be designed as a usable IDE (Integrated Development Environment) like Eclipse or NetBeans. Should be accessible to users with a variety of backgrounds. Tools (or subtools) should work together, seamlessly sharing a common representation for parts, devices, systems, and strains. New functionality should be easy to add via a plug-in interface, and should be able to take advantage of a common framework for displaying and manipulating DNA sequences, parts, devices, systems, and strains.

Contents

Specific tools

Project management tool

Design tool

Assembly tool

Simulation tool

Personal tools