Talk:20.109(S09):Data analysis (Day8): Difference between revisions
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| Line 71: | Line 71: | ||
|killed calcium binding | |killed calcium binding | ||
|- | |- | ||
| | |Red | ||
| | |D131G | ||
| | |~ 0.6 μM ; ~ 10.31 | ||
| | |~ 0.45 μM ; ~ 32.7 | ||
| | |~ 0.3 μM ; ~ 2 | ||
| | |D131G altered cooperativity and binding | ||
|- | |- | ||
| | | | ||
Revision as of 08:05, 8 March 2009
T/R data
Below is your calcium titration data, as well as data from pilot experiments done by the teaching faculty for comparison.
Please fill in the second table by Sunday, if not today, so your classmates can compare their data to yours.
| Day 7 data file | Data taken after 24 hr settling period |
| Media:S09_M1D7_TeachingExample.xls | Mutations: WT, S101L, Y64D |
| Media:S09_M1D7_TR_Blue.txt | |
| Media:S09_M1D7_TR_Green.txt | Media:S09_M1D7_TR_Green-redo.txt |
| Media:S09_M1D7_TR_Grey.txt | Media:S09_M1D7_TR_Grey-redo.txt |
| Media:S09_M1D7_TR_Orange.txt | |
| Media:S09_M1D7_TR_Pink.txt | Media:S09_M1D7_TR_Pink-redo.txt |
| Media:S09_M1D7_TR_Purple.txt | Media:S09_M1D7_TR_Purple-redo.txt |
| Media:S09_M1D7_TR_Red.txt | |
| Media:S09_M1D7_TR_Yellow.txt |
| Group Colour | X#Z Mutant | Most believable KD; n for X#Z mutant | Most believable KD; n for S101L | Most believable KD; n for WT | Comments |
| Teaching Faculty | Y64D | N/A | ~ 0.5 μM ; ~ 8 | ~ 0.3 μM; ~ 1(.2) | Y64D killed calcium response |
| Yellow | Y64D | N/A | ~0.4 μM; ~7 | ~0.5 μM; ~3 | No Calcium binding in Y64D |
| Grey | D22W | N/A | 0.46 μM ; ~ 8 | 0.3 μM; ~ 2 | killed calcium binding |
| Red | D131G | ~ 0.6 μM ; ~ 10.31 | ~ 0.45 μM ; ~ 32.7 | ~ 0.3 μM ; ~ 2 | D131G altered cooperativity and binding |
W/F data
Below is your calcium titration data, as well as data from pilot experiments done by the teaching faculty for comparison.
Please fill in the second table by Sunday, if not today, so your classmates can compare their data to yours.
| Group Colour | X#Z Mutant | Most believable KD; n for X#Z mutant | Most believable KD; n for S101L | Most believable KD; n for WT | Comments |
| Teaching Faculty | Y64D | N/A | ~ 0.5 μM ; ~ 8 | ~ 0.3 μM ; ~ 1(.2) | Y64D killed calcium response |
| Orange | E127K | Kd-.4558, n-1.2418 | N/A (using teaching data) | Kd=.6285, n=.1490 | S101L and E127K data was noisy |
| Green | T79P | Kd~0.84 μM, n~2.5 | Kd~0.52 μM, n~7.5 | Kd~0.50 μM, n~7.6 | T79P seems to have decreased cooperativity |
| Blue | E31R | Kd~0.49 μM, n~0.96 | Used Teaching Sample: Kd~0.5 μM, n~1.1 | Kd~0.45 μM, n~7.4 | E31R decreased calcium binding and cooperativity |
| Yellow | L105S | Kd~0.50 μM, n~0.141 | Kd~0.39 μM, n~0.331 | Kd~0.33 μM, n~0.722 | L105S and WT-IPC data was noisy. Appears as through L105S decreased cooperativity |
