Talk:20.109(S13): Spring 2013 schedule: Difference between revisions
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(New page: {{Template:20.109(S13)}} <div style="padding: 10px; width: 640px; border: 5px solid #99FF66;"> TEMP AGI <center> {| border=1px |'''MODULE''' |'''DAY''' |'''DATE''' |'''LECTURER''' |'''T...) |
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|'''DAY''' | |'''DAY''' | ||
|'''DATE''' | |'''DATE''' | ||
|'''LAB''' | |'''LAB''' | ||
|-- | |-- | ||
| | | N/A 0 | ||
| | | | ||
| Tue/Wed Feb 5/6 | | Tue/Wed Feb 5/6 | ||
| [[20.109(S13):Lab tour | Orientation]] | | [[20.109(S13):Lab tour | Orientation]] | ||
|-- | |-- | ||
| colspan="7" | | | colspan="7" | | ||
Line 28: | Line 22: | ||
| 1 | | 1 | ||
| Thur/Fri Feb 7/8 | | Thur/Fri Feb 7/8 | ||
| [[20.109(S13):Context-setting and primer design (Day1)| Context-setting and primer design]] | | [[20.109(S13):Context-setting and primer design (Day1)| Context-setting and primer design]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 2 | | 2 | ||
| Tue/Wed Feb 12/13 | | Tue/Wed Feb 12/13 | ||
| [[20.109(S13):DNA extraction (Day2)| DNA extraction]] | | [[20.109(S13):DNA extraction (Day2)| DNA extraction]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 3 | | 3 | ||
| Thur/Fri Feb 14/15 | | Thur/Fri Feb 14/15 | ||
| [[20.109(S13):PCR and paper discussion (Day3)| PCR and paper discussion]] | | [[20.109(S13):PCR and paper discussion (Day3)| PCR and paper discussion]] | ||
|-- | |-- | ||
! colspan="3" | President's Day Feb 18 | |||
! colspan=" | |||
| '''No lab Feb 19 or Feb 20''' | | '''No lab Feb 19 or Feb 20''' | ||
|-- | |-- | ||
Line 57: | Line 40: | ||
| 4 | | 4 | ||
| Thur/Fri Feb 21/22 | | Thur/Fri Feb 21/22 | ||
| [[20.109(S13):DNA cloning (Day4)| DNA cloning]] | | [[20.109(S13):DNA cloning (Day4)| DNA cloning]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 5 | | 5 | ||
| Tue/Wed Feb 26/27 | | Tue/Wed Feb 26/27 | ||
| [[20.109(S13):DNA sequencing and primer analysis (Day5)| DNA sequencing and primer analysis]] | | [[20.109(S13):DNA sequencing and primer analysis (Day5)| DNA sequencing and primer analysis]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 6 | | 6 | ||
| Thur/Fri Feb 28/ Mar 1 | | Thur/Fri Feb 28/ Mar 1 | ||
| [[20.109(S13):Journal club I (Day6)| Journal club I]] | | [[20.109(S13):Journal club I (Day6)| Journal club I]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 7 | | 7 | ||
| Tue/Wed Mar 5/6 | | Tue/Wed Mar 5/6 | ||
| [[20.109(S13):Phylogenetic analysis (Day7)| Phylogenetic analysis]] | | [[20.109(S13):Phylogenetic analysis (Day7)| Phylogenetic analysis]] | ||
|-- | |-- | ||
| 1 | | 1 | ||
| 8 | | 8 | ||
| Thur/Fri Mar 7/8 | | Thur/Fri Mar 7/8, '''No lecture today''' | ||
| [[20.109(S13):Journal club II (Day8)| Journal club II]] | | [[20.109(S13):Journal club II (Day8)| Journal club II]] | ||
|-- | |-- | ||
| colspan=" | | colspan="4" | | ||
|-- | |-- | ||
| 2 | | 2 | ||
| 1 | | 1 | ||
| Tue/Wed Mar 12/13 | | Tue/Wed Mar 12/13 | ||
|[[20.109(S13):Design mutant (Day1)| Design mutant]]<br><font color = CC0000><b>Module 1 Draft Due</b></font color><br> | |||
|[[20.109(S13):Design mutant (Day1)| Design mutant | |||
|-- | |-- | ||
| 2 | | 2 | ||
| 2 | | 2 | ||
| Thur/Fri Mar 14/15 | | Thur/Fri Mar 14/15 | ||
|[[20.109(S13):Site-directed mutagenesis (Day2)| Site-directed mutagenesis]] | |[[20.109(S13):Site-directed mutagenesis (Day2)| Site-directed mutagenesis]] | ||
|-- | |-- | ||
| 2 | | 2 | ||
| 3 | | 3 | ||
| Tue/Wed Mar 19/20 | | Tue/Wed Mar 19/20 | ||
|[[20.109(S13):Bacterial amplification of DNA (Day3)| Bacterial amplification of DNA]] | |[[20.109(S13):Bacterial amplification of DNA (Day3)| Bacterial amplification of DNA]] | ||
|*[[Media:20109_S13-M2Lec3_Jasanoff.pdf | M2D3 Lecture]] <br>*<font color = CC0000><b>Module 1 Primer Summary Due</b></font color><br>*[[Media:S13_M2D3-ANS.pdf | T/R Pre-Lab]]<br>*[[Media:M2D3_SKH_Final.pdf | W/F Pre-Lab]] | |*[[Media:20109_S13-M2Lec3_Jasanoff.pdf | M2D3 Lecture]] <br>*<font color = CC0000><b>Module 1 Primer Summary Due</b></font color><br>*[[Media:S13_M2D3-ANS.pdf | T/R Pre-Lab]]<br>*[[Media:M2D3_SKH_Final.pdf | W/F Pre-Lab]] | ||
Line 123: | Line 83: | ||
| 4 | | 4 | ||
| Thur/Fri Mar 21/22 | | Thur/Fri Mar 21/22 | ||
|[[20.109(S13):Prepare expression system (Day4)| Prepare expression system]] | |[[20.109(S13):Prepare expression system (Day4)| Prepare expression system]] | ||
|-- | |-- | ||
! colspan="3" | Spring Break Mar 25-29 | |||
! colspan=" | |||
| '''No lab all week''' | | '''No lab all week''' | ||
|-- | |-- | ||
Line 136: | Line 91: | ||
| 5 | | 5 | ||
| Tue/Wed Apr 2/3 | | Tue/Wed Apr 2/3 | ||
|[[20.109(S13):Induce protein and evaluate DNA (Day5)| Induce protein and evaluate DNA]] | |[[20.109(S13):Induce protein and evaluate DNA (Day5)| Induce protein and evaluate DNA]] | ||
|-- | |-- | ||
| 2 | | 2 | ||
| 6 | | 6 | ||
| Thur/Fri Apr 4/5 | | Thur/Fri Apr 4/5 | ||
|[[20.109(S13):Purify protein (Day6)| Purify protein]]<br><font color = CC0000><b>Module 1 Revision Due</b></font color><br> | |||
|[[20.109(S13):Purify protein (Day6)| Purify protein | |||
|-- | |-- | ||
| 2 | | 2 | ||
| 7 | | 7 | ||
| Tue/Wed Apr 9/10 | | Tue/Wed Apr 9/10 | ||
|[[20.109(S13):Characterize protein expression (Day7)| Characterize protein expression]] | |[[20.109(S13):Characterize protein expression (Day7)| Characterize protein expression]] | ||
|-- | |-- | ||
| 2 | | 2 | ||
| 8 | | 8 | ||
| Thur/Fri Apr 11/12 | | Thur/Fri Apr 11/12 | ||
|[[20.109(S13):Assess protein function (Day8)| Assess protein function]] | |[[20.109(S13):Assess protein function (Day8)| Assess protein function]] | ||
|-- | |-- | ||
! colspan="3" | Patriot's Day April 15-16 | |||
! colspan=" | |||
| '''No lab Apr 16 or Apr 17''' | | '''No lab Apr 16 or Apr 17''' | ||
|-- | |-- | ||
| colspan=" | | colspan="4" | | ||
|-- | |-- | ||
| 3 | | 3 | ||
| 1 | | 1 | ||
| Thur/Fri Apr 18/19 | | Thur/Fri Apr 18/19 | ||
| [[20.109(S13):Design experiment (Day1)| Design experiment]] | | [[20.109(S13):Design experiment (Day1)| Design experiment]] | ||
|-- | |-- | ||
| 3 | | 3 | ||
| 2 | | 2 | ||
| Tue/Wed Apr 23/24 | | Tue/Wed Apr 23/24 | ||
| [[20.109(S13):Initiate cell culture (Day2)| Initiate cell culture]]<br><b>Module 2 Report Due MONDAY APRIL 22 by 5 pm for all.</b></font color><br> | |||
| [[20.109(S13):Initiate cell culture (Day2)| Initiate cell culture | |||
|-- | |-- | ||
| 3 | | 3 | ||
| 3 | | 3 | ||
| Thur/Fri Apr 25/26 | | Thur/Fri Apr 25/26 | ||
| [[20.109(S13):Testing cell viability (Day3)| Testing cell viability]] | | [[20.109(S13):Testing cell viability (Day3)| Testing cell viability]] | ||
|-- | |-- | ||
| 3 | | 3 | ||
| 4 | | 4 | ||
| Tue/Wed Apr 30/May 1 | | Tue/Wed Apr 30/May 1 | ||
| [[20.109(S13):Preparing cells for analysis (Day4)| Preparing cells for analysis]] | | [[20.109(S13):Preparing cells for analysis (Day4)| Preparing cells for analysis]] | ||
|-- | |-- | ||
| 3 | | 3 | ||
| 5 | | 5 | ||
| Thur/Fri May 2/3 | | Thur/Fri May 2/3 | ||
| [[20.109(S13):Initiating transcript and protein assays (Day5)| Initiating transcript and protein assays]] | | [[20.109(S13):Initiating transcript and protein assays (Day5)| Initiating transcript and protein assays]] | ||
|-- | |-- | ||
| 3 | | 3 | ||
| 6 | | 6 | ||
| Tue/Wed May 7/8 | | Tue/Wed May 7/8 | ||
| [[20.109(S13):Transcript-level analysis (Day6)| Transcript-level analysis]] | | [[20.109(S13):Transcript-level analysis (Day6)| Transcript-level analysis]] | ||
|-- | |-- | ||
| 3 | | 3 | ||
| 7 | | 7 | ||
| Thur/Fri May 9/10 | | Thur/Fri May 9/10 | ||
| [[20.109(S13):Protein-level and wrap-up analysis (Day7)| Protein-level and wrap-up analysis]]<br><font color = CC0000><b>Module 3 Summary Due</b></font color><br> | |||
| [[20.109(S13):Protein-level and wrap-up analysis (Day7)| Protein-level and wrap-up analysis | |||
|-- | |-- | ||
| 3 | | 3 | ||
| 8 | | 8 | ||
| Tue/Wed May 14/15 | | Tue/Wed May 14/15 | ||
| [[20.109(S13):Student presentations (Day8)| Student presentations]] | | [[20.109(S13):Student presentations (Day8)| Student presentations]] | ||
|-- | |-- | ||
|} | |} | ||
</center> | </center> | ||
Revision as of 12:21, 6 December 2013
TEMP AGI
MODULE | DAY | DATE | LAB | |||
N/A 0 | Tue/Wed Feb 5/6 | Orientation | ||||
1 | 1 | Thur/Fri Feb 7/8 | Context-setting and primer design | |||
1 | 2 | Tue/Wed Feb 12/13 | DNA extraction | |||
1 | 3 | Thur/Fri Feb 14/15 | PCR and paper discussion | |||
President's Day Feb 18 | No lab Feb 19 or Feb 20 | |||||
---|---|---|---|---|---|---|
1 | 4 | Thur/Fri Feb 21/22 | DNA cloning | |||
1 | 5 | Tue/Wed Feb 26/27 | DNA sequencing and primer analysis | |||
1 | 6 | Thur/Fri Feb 28/ Mar 1 | Journal club I | |||
1 | 7 | Tue/Wed Mar 5/6 | Phylogenetic analysis | |||
1 | 8 | Thur/Fri Mar 7/8, No lecture today | Journal club II | |||
2 | 1 | Tue/Wed Mar 12/13 | Design mutant Module 1 Draft Due | |||
2 | 2 | Thur/Fri Mar 14/15 | Site-directed mutagenesis | |||
2 | 3 | Tue/Wed Mar 19/20 | Bacterial amplification of DNA | * M2D3 Lecture *Module 1 Primer Summary Due * T/R Pre-Lab * W/F Pre-Lab | ||
2 | 4 | Thur/Fri Mar 21/22 | Prepare expression system | |||
Spring Break Mar 25-29 | No lab all week | |||||
2 | 5 | Tue/Wed Apr 2/3 | Induce protein and evaluate DNA | |||
2 | 6 | Thur/Fri Apr 4/5 | Purify protein Module 1 Revision Due | |||
2 | 7 | Tue/Wed Apr 9/10 | Characterize protein expression | |||
2 | 8 | Thur/Fri Apr 11/12 | Assess protein function | |||
Patriot's Day April 15-16 | No lab Apr 16 or Apr 17 | |||||
3 | 1 | Thur/Fri Apr 18/19 | Design experiment | |||
3 | 2 | Tue/Wed Apr 23/24 | Initiate cell culture Module 2 Report Due MONDAY APRIL 22 by 5 pm for all. | |||
3 | 3 | Thur/Fri Apr 25/26 | Testing cell viability | |||
3 | 4 | Tue/Wed Apr 30/May 1 | Preparing cells for analysis | |||
3 | 5 | Thur/Fri May 2/3 | Initiating transcript and protein assays | |||
3 | 6 | Tue/Wed May 7/8 | Transcript-level analysis | |||
3 | 7 | Thur/Fri May 9/10 | Protein-level and wrap-up analysis Module 3 Summary Due | |||
3 | 8 | Tue/Wed May 14/15 | Student presentations |