Talk:BE.109:Bio-material engineering/Sequence analysis

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(Tuesday/Thursday Lab Sequence Data)
(Tuesday/Thursday Lab Sequence Data)
Line 35: Line 35:
|B
|B
|WRxxxACRCVxx
|WRxxxACRCVxx
-
|medium binding
+
|0.3 x pCT-CON
|2 cysteines may be signficant
|2 cysteines may be signficant
|-
|-
Line 41: Line 41:
|C
|C
|MYYVAASxSVLM
|MYYVAASxSVLM
-
|medium-good binding
+
|2 x pCT-CON
|2 methionines and 2 serines may be significant
|2 methionines and 2 serines may be significant
|-
|-
Line 47: Line 47:
|D
|D
|*LARPVA*xxIx
|*LARPVA*xxIx
-
|good binding
+
|10 x pCT-CON
-
|stop codons are TAG and TGA
+
|best binder. stop codons are TAG and TGA
|-
|-
|Yellow
|Yellow

Revision as of 14:03, 16 May 2006

Tuesday/Thursday Lab Sequence Data

team color candidate number sequence relative strength comments/notes
Green A XXWAPAXXXXXX 1/18 of pCT-CON This sequence did not show significant binding ability, although because of the poor sequencing data, we can not make any definite conclusions on the cause of the poor gold binding ability.
Green B XXXXVGXXXXXX 3.5 of pCT-CON This sequence has some gold binding ability, however unlike D, the sequence data obtained for this colony is quite poor. As a result, we can not make any definite conclusions on what lead to it's binding.
Green C XXXXXXXXSLFL .83 of pCT-CON This sequence did not show significant binding ability, although because of the poor sequencing data, we can not make any definite conclusions on the cause of the poor gold binding ability.
Green D LRXXTXGLSLCR 7.83 of pCT-CON Colony D was the only one from which we got some sort of meaningful sequence data from. Luckily, it was also our strongest binder. The sequence data shows a prevalence of Yellow Aliphatic Groups (Leucine) and Green Hydroxyl Groups (Serine), which may be important for gold binding.
Purple B WRxxxACRCVxx 0.3 x pCT-CON 2 cysteines may be signficant
Purple C MYYVAASxSVLM 2 x pCT-CON 2 methionines and 2 serines may be significant
Purple D *LARPVA*xxIx 10 x pCT-CON best binder. stop codons are TAG and TGA
Yellow A EXXXPIXXXXXX 1.89 of pCT-CON
Yellow B RXRLRVXXXXVR 0.413 of pCT-CON
Yellow C EGXXPXXXXXXX 0.55 of pCT-CON
Yellow D FWCQSRWXEILV 1.72 of pCT-CON

Wednesday/Friday Lab Sequence Data

team color candidate number sequence relative strength comments/notes

HAVE A GREAT SUMMER!!

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