Talk:IGEM:MIT/2006/Communications: Difference between revisions

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*[http://mts-msb.nature.com/cgi-bin/main.plex?form_type=display_auth_instructions Author guidlines for Nature MSB]
*[http://mts-msb.nature.com/cgi-bin/main.plex?form_type=display_auth_instructions Author guidlines for Nature MSB]
*[http://www.pnas.org/misc/iforc.shtml PNAS information for authors]
*[http://www.pnas.org/misc/iforc.shtml PNAS information for authors]
*[http://www.pnas.org/misc/LaTex.shtml Latex template]


==General outstanding issues==
*Make sure J45900 gets into registry
*Submit sequences to Genbank


==Questions for Stephen==
===Odor thresholds===
#Is the sequence of the J45017 reverse primer correct?  It seems quite short.   
"The odor threshold of a compound is the lowest concentration at which its smell can be detected."  
#*A: I think I checked both the tube and the wiki, but I can doublecheck tomorrow.
 
#Did you use the Knight or Endy site directed mutagenesis protocol? (http://openwetware.org/wiki/IGEM:MIT/2006/Notebook/2006-8-10#Mutagenesis says Knight but you told me Endy)
*[http://people.ok.ubc.ca/neggers/Chem422A/The%20Odor%20and%20Aroma%20of%20Wine.pdf Isoamyl acetate]
#*A: We used the Knight protocol.
*[http://www.sciencelab.com/xMSDS-Methyl_salicylate-9927362 Methyl salicylate]
#Quantification of banana timecourse
#*A: I sent both Alex and Amy an email today about a meeting tomorrow.
#**You might want to do some background research on quantification of GC data.
#The reverse primer for <bbpart>BBa_J45992</bbpart> listed in the google doc does not match what is listed in the Registry
#*A: I will double check this, but I'm pretty sure that I confirmed this via the wiki and Isadora's order sheets.  I do not know who wrote the Registry page (maybe Andre), but I do trust the lab notebook more than the Registry.
#**OK then the Registry page needs to be fixed after you confirm.
#***Double-checked... google doc is correct, fixed Registry
#The forward and reverse primers for <bbpart>BBa_J45993</bbpart> listed in the google doc does not match what is listed in the Registry
#*A: I will double check this, but I'm pretty sure that I confirmed this via the wiki and Isadora's order sheets.  I do not know who wrote the Registry page (maybe Andre), but I do trust the lab notebook more than the Registry.
#**OK then the Registry page needs to be fixed after you confirm.
#***Double-checked... google doc is correct, fixed Registry
#BBa_J45900 needs to be entered into the Registry
#<bbpart>BBa_J45992</bbpart> and <bbpart>BBa_J45994</bbpart> need to be submitted to the Registry. Or at least the GFP versions do.
#Does <bbpart>BBa_J45017</bbpart> still have the PstI site or has it been mutated out?  If it has been mutated out, then the Registry needs to be updated.

Latest revision as of 12:59, 28 April 2008

General outstanding issues

  • Make sure J45900 gets into registry
  • Submit sequences to Genbank

Odor thresholds

"The odor threshold of a compound is the lowest concentration at which its smell can be detected."