Talk:Wikiomics:RNA-Seq: Difference between revisions
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Darek Kedra (talk | contribs) m (→SpliceTrap: new section) |
Darek Kedra (talk | contribs) m (→wapRNA: new section) |
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http://rulai.cshl.edu/splicetrap/ | http://rulai.cshl.edu/splicetrap/ | ||
SpliceTrap is a method to quantify exon inclusion levels using paired-end RNA-seq data. | SpliceTrap is a method to quantify exon inclusion levels using paired-end RNA-seq data. | ||
== wapRNA == | |||
wapRNA | |||
high-throughput RNA-Seq data (wapRNA) from next generation sequencing (NGS) platforms, such as Genome Analyzer of Illumina Inc. (Solexa) and SOLiD of Applied Biosystems (SOLiD). | |||
http://waprna.big.ac.cn/ | |||
Revision as of 05:39, 12 September 2011
Splice analysers
Cufflinks
SpliCQ
http://drupal.bio.ifi.lmu.de/SpliCQ
IsoLasso
http://www.cs.ucr.edu/~liw/isolasso.html
SpliceTrap
http://rulai.cshl.edu/splicetrap/ SpliceTrap is a method to quantify exon inclusion levels using paired-end RNA-seq data.
wapRNA
wapRNA
high-throughput RNA-Seq data (wapRNA) from next generation sequencing (NGS) platforms, such as Genome Analyzer of Illumina Inc. (Solexa) and SOLiD of Applied Biosystems (SOLiD). http://waprna.big.ac.cn/
