The mRNA Decay Resource:Protocols and Resources

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Yeast protocols

From the Atkin lab
Total RNA extraction Support Protocol: Preparation of buffer saturated phenol
Measurement of Saccharomyces cerevisiae mRNA half lives
Measurement of Candida albicans mRNA half lives:

  1. Kebaara BW, Nielsen LE, Nickerson KW, and Atkin AL. . pmid:17036064. PubMed HubMed [Paper1]

Yeast polyribosome preparation for RNA
Electrophoresis of RNA through gels containing formaldehyde
Northern transfer of RNA
Preparation of oligolabeled probes
Hybridization of RNA blots
Removal of oligolabeled probes from GeneScreen Plus membranes
Yeast polyribosome preparation - Proteins
Gel electrophoresis of proteins in denaturing conditions
Electrotransfer of proteins from polyacrylamide gels to membranes

From Fred Sherman

  1. Sherman F. . pmid:12073320. PubMed HubMed [Paper1]

From Mike Culbertson Global measurement of mRNA half lives

  1. Guan Q, Zheng W, Tang S, Liu X, Zinkel RA, Tsui KW, Yandell BS, and Culbertson MR. . pmid:17166056. PubMed HubMed [Paper1]

General RNA Protocols

  1. Bajak EZ and Hagedorn CH. . pmid:18369981. PubMed HubMed [Paper1]
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