Tregwiki:Discover motif combinations

From OpenWetWare

Revision as of 07:49, 20 December 2006 by Max (Talk)
(diff) ←Older revision | Current revision (diff) | Newer revision→ (diff)
Jump to: navigation, search
  • Bayes Promoter scans your sequences for matrix matches and tries to infer a combinations of matrices, with preferred distances and orientation which in turn can be used to scan other sequences.
  • a recent paper describes software similar to DPM
  • MODULATOR in the cread library (see this wiki, APIs)
  • ModuleSearcher
  • DASS is a general purpose module finder and claims to be applicable to this problem...
Personal tools