Turnbaugh:Publications: Difference between revisions
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#<b>Turnbaugh, P.J.</b>, Henrissat, B., and J.I. Gordon. Viewing the human microbiome through three-dimensional glasses: integrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes. Acta Cryst. F. 66, 1261-1264 (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Turnbaugh, P.J.</b>, Henrissat, B., and J.I. Gordon. Viewing the human microbiome through three-dimensional glasses: integrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes. Acta Cryst. F. 66, 1261-1264 (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/Turnbaugh_ActaF.pdf PDF] | ||
#<b>Gootenberg, D.B.</b> and <b>P.J. Turnbaugh</b>. Humanized animal models of the microbiome. J. Animal Sci., epub ahead of print (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Gootenberg, D.B.</b> and <b>P.J. Turnbaugh</b>. Humanized animal models of the microbiome. J. Animal Sci., epub ahead of print (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/Gootenberg_JAS.pdf PDF] | ||
#Peterson, D.A. and <b>P.J. Turnbaugh</b>. A microbe-dependent viral key to Crohn’s box. Sci. Transl. Med. 2, 43ps39 (2010)+. [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #Peterson, D.A. and <b>P.J. Turnbaugh</b>. A microbe-dependent viral key to Crohn’s box. Sci. Transl. Med. 2, 43ps39 (2010)+. [http://obs.rc.fas.harvard.edu/turnbaugh/Peterson_STM.pdf PDF] | ||
#Caporaso, J.G., Lauber, C.L., Walters, W.A., Berg-Lyons, D., Lozupone, C.A., <b>Turnbaugh, P.J.</b>, Fierer, N., and R. Knight. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. PNAS, Epub ahead of print (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #Caporaso, J.G., Lauber, C.L., Walters, W.A., Berg-Lyons, D., Lozupone, C.A., <b>Turnbaugh, P.J.</b>, Fierer, N., and R. Knight. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. PNAS, Epub ahead of print (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/Caporaso_PNAS.pdf PDF] | ||
#Caporaso, J.G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F.D., Costello, E.K., Fierer, N., Pena, A.G., Goodrich, J.K., Gordon, J.I., Huttley, G.A., Kelley, S.T., Knights, D., Koenig, J.E., Ley, R.E., Lozupone, C.A., McDonald, D., Muegge, B.D., Pirrung, M., Reeder, J., Sevinsky, J.R., <b>Turnbaugh, P.J.</b>, Walters, W.A., Widmann, J., Yatsunenko, T., Zanefeld, J., and R. Knight. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods, Epub ahead of print (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #Caporaso, J.G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F.D., Costello, E.K., Fierer, N., Pena, A.G., Goodrich, J.K., Gordon, J.I., Huttley, G.A., Kelley, S.T., Knights, D., Koenig, J.E., Ley, R.E., Lozupone, C.A., McDonald, D., Muegge, B.D., Pirrung, M., Reeder, J., Sevinsky, J.R., <b>Turnbaugh, P.J.</b>, Walters, W.A., Widmann, J., Yatsunenko, T., Zanefeld, J., and R. Knight. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods, Epub ahead of print (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/Caporaso_QIIME.pdf PDF] | ||
#<b>Turnbaugh, P.J.</b>, Ridaura, V.K., Faith, J.J., Rey, F.E., Knight, R., and J.I. Gordon. The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Sci. Transl. Med. 1, 6ra14 (2009). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Turnbaugh, P.J.</b>, Ridaura, V.K., Faith, J.J., Rey, F.E., Knight, R., and J.I. Gordon. The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Sci. Transl. Med. 1, 6ra14 (2009). [http://obs.rc.fas.harvard.edu/turnbaugh/Turnbaugh_STM.pdf PDF] | ||
#<b>Turnbaugh, P.J.</b>, Quince, C., Faith, J.J., McHardy, A.C., Yatsunenko, T., Niazi, F., Affourtit, J., Egholm, M., Henrissat, B., Knight, R., and J.I. Gordon. Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. PNAS, Epub ahead of print (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Turnbaugh, P.J.</b>, Quince, C., Faith, J.J., McHardy, A.C., Yatsunenko, T., Niazi, F., Affourtit, J., Egholm, M., Henrissat, B., Knight, R., and J.I. Gordon. Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. PNAS, Epub ahead of print (2010). [http://obs.rc.fas.harvard.edu/turnbaugh/Turnbaugh_PNAS2010.pdf PDF] | ||
#<b>Turnbaugh, P.J.</b> and J.I. Gordon. The core gut microbiome, energy balance, and obesity. J. Phys. 587, 4153-4158 (2009). Epub 2009 June 2. [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Turnbaugh, P.J.</b> and J.I. Gordon. The core gut microbiome, energy balance, and obesity. J. Phys. 587, 4153-4158 (2009). Epub 2009 June 2. [http://obs.rc.fas.harvard.edu/turnbaugh/Turnbaugh_JPhys.pdf PDF] | ||
#Mahowald, M.A., Rey, F.E., Seedorf, H., <b>Turnbaugh, P.J.</b>, Fulton, R.S., Wollam, A., Shah, N., Wang, C., Magrini, V., Wilson, R.K., Cantarel, B.L., Coutinho, P.M., Henrissat, B., Crock, L.W., Russell, A., Verberkmoes, N.C., Hettich, R., and J.I. Gordon. Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. PNAS 106, 5859-5864 (2009). Epub 2009 Mar 24. [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #Mahowald, M.A., Rey, F.E., Seedorf, H., <b>Turnbaugh, P.J.</b>, Fulton, R.S., Wollam, A., Shah, N., Wang, C., Magrini, V., Wilson, R.K., Cantarel, B.L., Coutinho, P.M., Henrissat, B., Crock, L.W., Russell, A., Verberkmoes, N.C., Hettich, R., and J.I. Gordon. Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. PNAS 106, 5859-5864 (2009). Epub 2009 Mar 24. [http://obs.rc.fas.harvard.edu/turnbaugh/Mahowald_PNAS.pdf PDF] | ||
#<b>Turnbaugh, P.J.</b>, Hamady, M., Yatsunenko, T., Cantarel, B.L., Duncan, A., Ley, R.E., Sogin, M.L., Jones, W.J., Roe, B.A., Affourtit, J.P., Egholm, M., Henrissat, B., Heath, A.C., Knight, R., and J.I. Gordon. A core gut microbiome in obese and lean twins. Nature 457, 480-484 (2009). Epub 2008 Nov 30. [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Turnbaugh, P.J.</b>, Hamady, M., Yatsunenko, T., Cantarel, B.L., Duncan, A., Ley, R.E., Sogin, M.L., Jones, W.J., Roe, B.A., Affourtit, J.P., Egholm, M., Henrissat, B., Heath, A.C., Knight, R., and J.I. Gordon. A core gut microbiome in obese and lean twins. Nature 457, 480-484 (2009). Epub 2008 Nov 30. [http://obs.rc.fas.harvard.edu/turnbaugh/Turnbaugh_Nature2009.pdf PDF] | ||
#<b>Turnbaugh, P.J.</b> and J.I. Gordon. An invitation to the marriage of metagenomics and metabolomics. Cell 134, 708-713 (2008). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Turnbaugh, P.J.</b> and J.I. Gordon. An invitation to the marriage of metagenomics and metabolomics. Cell 134, 708-713 (2008). [http://obs.rc.fas.harvard.edu/turnbaugh/Turnbaugh_Gordon.pdf PDF] | ||
#Ley, R.E.,Hamady, M., Lozupone, C., <b>Turnbaugh, P.J.</b>, Ramey, R.R., Bircher, J.S., Schlegel, M.L., Tucker, T.A., Schrenzel, M.D., Knight, R., and J.I. Gordon. Evolution of mammals and their gut microbes. Science 320, 1647-1651 (2008). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #Ley, R.E.,Hamady, M., Lozupone, C., <b>Turnbaugh, P.J.</b>, Ramey, R.R., Bircher, J.S., Schlegel, M.L., Tucker, T.A., Schrenzel, M.D., Knight, R., and J.I. Gordon. Evolution of mammals and their gut microbes. Science 320, 1647-1651 (2008). [http://obs.rc.fas.harvard.edu/turnbaugh/Ley_Science2008.pdf PDF] | ||
#<b>Turnbaugh, P.J.</b>, Backhed, F., Fulton, L., and J.I. Gordon. Diet-induced obesity in linked to marked but reversible alterations in the mouse distal gut microbiome. Cell Host Microbe 3, 213-223 (2008). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Turnbaugh, P.J.</b>, Backhed, F., Fulton, L., and J.I. Gordon. Diet-induced obesity in linked to marked but reversible alterations in the mouse distal gut microbiome. Cell Host Microbe 3, 213-223 (2008). [http://obs.rc.fas.harvard.edu/turnbaugh/Turnbaugh_CHM.pdf PDF] | ||
#Zanefeld, J., <b>Turnbaugh, P.J.</b>, Lozupone, C., Ley, R.E., Hamady, M., Gordon, J.I., and R. Knight. Host-bacterial coevolution and the search for new drug targets. Curr. Op. Chem. Bio. 12, 1-6 (2008). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #Zanefeld, J., <b>Turnbaugh, P.J.</b>, Lozupone, C., Ley, R.E., Hamady, M., Gordon, J.I., and R. Knight. Host-bacterial coevolution and the search for new drug targets. Curr. Op. Chem. Bio. 12, 1-6 (2008). [http://obs.rc.fas.harvard.edu/turnbaugh/Zanefeld.pdf PDF] | ||
#<b>Turnbaugh, P.J.</b>, Ley, R.E., Hamady, M., Fraser-Liggett, C.M., Knight, R. & J.I. Gordon. The human microbiome project. Nature 449, 804-810 (2007). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Turnbaugh, P.J.</b>, Ley, R.E., Hamady, M., Fraser-Liggett, C.M., Knight, R. & J.I. Gordon. The human microbiome project. Nature 449, 804-810 (2007). [http://obs.rc.fas.harvard.edu/turnbaugh/Turnbaugh_HMP.pdf PDF] | ||
#<b>Turnbaugh, P.J.</b>, Ley, R.E., Mahowald, M., Magrini, V., Mardis, E.R., and J.I. Gordon. An obesity-associated microbiome with increased capacity for energy harvest. Nature 444, 1027-1031 (2006). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #<b>Turnbaugh, P.J.</b>, Ley, R.E., Mahowald, M., Magrini, V., Mardis, E.R., and J.I. Gordon. An obesity-associated microbiome with increased capacity for energy harvest. Nature 444, 1027-1031 (2006). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | ||
#Ley, R.E., <b>Turnbaugh, P.J.</b>, Klein, S., and J.I. Gordon. Human gut microbes associated with obesity. Nature 444, 1022-1023 (2006). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | #Ley, R.E., <b>Turnbaugh, P.J.</b>, Klein, S., and J.I. Gordon. Human gut microbes associated with obesity. Nature 444, 1022-1023 (2006). [http://obs.rc.fas.harvard.edu/turnbaugh/ PDF] | ||
Revision as of 13:53, 27 December 2010
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