Ty Thomson - Revision history

Ty M. Thomson at 19:39, 1 March 2010

Ty M. Thomson — Mon, 01 Mar 2010 19:39:14 GMT

←Older revision		Revision as of 19:39, 1 March 2010
Line 33:		Line 33:
	===Blog===		===Blog===
	[http://blog.plectix.com/ The Plectix Blog]		[http://blog.plectix.com/ The Plectix Blog]
-
-	~~===Publications===~~
-	*Stewart, I. I., Thomson, T., Figeys, D., and Duewel, H. S. (2003). "The Use of 18O Labeling as a Tool for Proteomic Applications", [http://doi.contentdirections.com/mr/humana.jsp?doi=10.1226/1588293408 Handbook of Proteomic Methods], Edited by P. Michael Conn. Chapter 11, pages 145-179. (Totowa, New Jersey: Humana Press Inc.)
-	*Stewart, I. I., Thomson, T., and Figeys, D. (2001). 18O labeling: a tool for proteomics. Rapid Commun. Mass. Spectrom. 15, 2456-2465 [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11746917 link on Pubmed]

Ty M. Thomson at 15:30, 8 May 2009

Ty M. Thomson — Fri, 08 May 2009 15:30:59 GMT

←Older revision		Revision as of 15:30, 8 May 2009
Line 1:		Line 1:
	==Personal==		==Personal==
	===Bio===		===Bio===
-	Born in Toronto in 1979. Grew up there, and attended the [http://www.utoronto.ca University of Toronto] (UofT, not to be confused with UT, which is some school in texas I hear). Graduated in 2002 with a BASc (BASc = bachelor of applied science = canadian engineering degree) in Biomedical Engineering from the [http://www.engsci.utoronto.ca/ Engineering Science] program. For 3 summers in undergrad I worked for MDS Proteomics (which changed names to Protana Inc, and was bought out by [http://www.transitiontherapeutics.com/ Transition Therapeutics]). I started grad school at [http://web.mit.edu/ MIT] in [http://web.mit.edu/be Biological Engineering] (BE) in the fall of 2002. In January of 2003 I joined [[Drew Endy]]'s lab. I mainly joined his lab cause he seemed to be the craziest and most outside-of-the-box faculty member in BE. I was been loosely involved in the synthetic biology community there (although my research was not really synth bio related), including the sythetic biology working group, and I helped organize [http://syntheticbiology.org/Synthetic_Biology_1.0.html Synthetic Biology 1.0]. I'm now working at [http://plectix.com/ Plectix BioSystems] in Somerville MA, helping develop ~~some~~ cool ~~software~~ for biological modeling.	+	Born in Toronto in 1979. Grew up there, and attended the [http://www.utoronto.ca University of Toronto] (UofT, not to be confused with UT, which is some school in texas I hear). Graduated in 2002 with a BASc (BASc = bachelor of applied science = canadian engineering degree) in Biomedical Engineering from the [http://www.engsci.utoronto.ca/ Engineering Science] program. For 3 summers in undergrad I worked for MDS Proteomics (which changed names to Protana Inc, and was bought out by [http://www.transitiontherapeutics.com/ Transition Therapeutics]). I started grad school at [http://web.mit.edu/ MIT] in [http://web.mit.edu/be Biological Engineering] (BE) in the fall of 2002. In January of 2003 I joined [[Drew Endy]]'s lab. I mainly joined his lab cause he seemed to be the craziest and most outside-of-the-box faculty member in BE. I was been loosely involved in the synthetic biology community there (although my research was not really synth bio related), including the sythetic biology working group, and I helped organize [http://syntheticbiology.org/Synthetic_Biology_1.0.html Synthetic Biology 1.0]. I'm now working at [http://plectix.com/ Plectix BioSystems] in Somerville MA, helping develop a cool web-based platform for biological modeling called [http://www.cellucidate.com Cellucidate].


Line 10:		Line 10:
	*Snowboarding		*Snowboarding
	*Mountain biking		*Mountain biking
-	*~~Roller blading~~	+	*Rollerblading
	*Playing various team sports - hockey, football, softball (if that counts as a 'sport')		*Playing various team sports - hockey, football, softball (if that counts as a 'sport')

Ty M. Thomson at 19:36, 21 November 2008

Ty M. Thomson — Fri, 21 Nov 2008 19:36:52 GMT

←Older revision		Revision as of 19:36, 21 November 2008
Line 1:		Line 1:
	==Personal==		==Personal==
	===Bio===		===Bio===
-	Born in Toronto in 1979. Grew up there, and attended the [http://www.utoronto.ca University of Toronto] (UofT, not to be confused with UT, which is some school in texas I hear). Graduated in 2002 with a BASc (BASc = bachelor of applied science = canadian engineering degree) in Biomedical Engineering from the [http://www.engsci.utoronto.ca/ Engineering Science] program. For 3 summers in undergrad I worked for MDS Proteomics (which changed names to Protana Inc, and was bought out by [http://www.transitiontherapeutics.com/ Transition Therapeutics]). I started grad school at [http://web.mit.edu/ MIT] in [http://web.mit.edu/be Biological Engineering] (BE) in the fall of 2002. In January of 2003 I joined [[Drew Endy]]'s lab. I mainly joined his lab cause he seemed to be the craziest and most outside-of-the-box faculty member in BE. I ~~have~~ been loosely involved in the synthetic biology community ~~here~~ (although my research is not really synth bio related), including the sythetic biology working group, and I helped organize [http://syntheticbiology.org/Synthetic_Biology_1.0.html Synthetic Biology 1.0]. I ~~am somehow on the OWW steering committee, despite the fact that I rarely use OWW~~. ~~I seem to be the skeptic~~/~~realist~~ in ~~the group~~, ~~which is needed 'cause I work with a bunch of optimistic hippies~~.	+	Born in Toronto in 1979. Grew up there, and attended the [http://www.utoronto.ca University of Toronto] (UofT, not to be confused with UT, which is some school in texas I hear). Graduated in 2002 with a BASc (BASc = bachelor of applied science = canadian engineering degree) in Biomedical Engineering from the [http://www.engsci.utoronto.ca/ Engineering Science] program. For 3 summers in undergrad I worked for MDS Proteomics (which changed names to Protana Inc, and was bought out by [http://www.transitiontherapeutics.com/ Transition Therapeutics]). I started grad school at [http://web.mit.edu/ MIT] in [http://web.mit.edu/be Biological Engineering] (BE) in the fall of 2002. In January of 2003 I joined [[Drew Endy]]'s lab. I mainly joined his lab cause he seemed to be the craziest and most outside-of-the-box faculty member in BE. I was been loosely involved in the synthetic biology community there (although my research was not really synth bio related), including the sythetic biology working group, and I helped organize [http://syntheticbiology.org/Synthetic_Biology_1.0.html Synthetic Biology 1.0]. I'm now working at [http://plectix.com/ Plectix BioSystems] in Somerville MA, helping develop some cool software for biological modeling.
		+

	[[Image:Ty_and_beer.jpg\|thumb\|right\|Ty on the Sam Adams brewery tour]]		[[Image:Ty_and_beer.jpg\|thumb\|right\|Ty on the Sam Adams brewery tour]]
Line 17:		Line 18:

	===Contact===		===Contact===
-	~~'''Address'''<br/>~~
-	~~31 Ames St.<br/>~~
-	~~68-570<br/>~~
-	~~Cambridge, MA 02139<br>~~
	'''Email Address'''<br/>		'''Email Address'''<br/>
-	~~tmt~~ -at- ~~mit~~ -dot- ~~edu<br/>~~	+	ty -dot- thomson -at- gmail -dot- com<br/>
-	~~'''Phone Number'''<br/>~~	+
-	~~617.258.8684~~<br/>	+

	==Science==		==Science==
Line 34:		Line 29:

	===Thesis Project===		===Thesis Project===
-	~~[[TMT Thesis Project\|Characterization of Signaling Pathways Using Time-Varying Stimuli]]~~
-
	[http://www.yeastpheromonemodel.org/ YeastPheromoneModel.org]		[http://www.yeastpheromonemodel.org/ YeastPheromoneModel.org]

-	~~[[TMT Thesis Notes\|Near Future Plan and Notes]]~~	+	===Blog===
-		+	[http://blog.plectix.com/ The Plectix Blog]
-	===~~Other~~===	+
-	[~~[TMT To Do List]~~]	+

	===Publications===		===Publications===
	*Stewart, I. I., Thomson, T., Figeys, D., and Duewel, H. S. (2003). "The Use of 18O Labeling as a Tool for Proteomic Applications", [http://doi.contentdirections.com/mr/humana.jsp?doi=10.1226/1588293408 Handbook of Proteomic Methods], Edited by P. Michael Conn. Chapter 11, pages 145-179. (Totowa, New Jersey: Humana Press Inc.)		*Stewart, I. I., Thomson, T., Figeys, D., and Duewel, H. S. (2003). "The Use of 18O Labeling as a Tool for Proteomic Applications", [http://doi.contentdirections.com/mr/humana.jsp?doi=10.1226/1588293408 Handbook of Proteomic Methods], Edited by P. Michael Conn. Chapter 11, pages 145-179. (Totowa, New Jersey: Humana Press Inc.)
	*Stewart, I. I., Thomson, T., and Figeys, D. (2001). 18O labeling: a tool for proteomics. Rapid Commun. Mass. Spectrom. 15, 2456-2465 [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11746917 link on Pubmed]		*Stewart, I. I., Thomson, T., and Figeys, D. (2001). 18O labeling: a tool for proteomics. Rapid Commun. Mass. Spectrom. 15, 2456-2465 [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11746917 link on Pubmed]

Ty M. Thomson: /* Thesis Project */

Ty M. Thomson — Thu, 19 Oct 2006 22:53:23 GMT

Thesis Project

←Older revision		Revision as of 22:53, 19 October 2006
Line 35:		Line 35:
	===Thesis Project===		===Thesis Project===
	[[TMT Thesis Project\|Characterization of Signaling Pathways Using Time-Varying Stimuli]]		[[TMT Thesis Project\|Characterization of Signaling Pathways Using Time-Varying Stimuli]]
		+
		+	[http://www.yeastpheromonemodel.org/ YeastPheromoneModel.org]

	[[TMT Thesis Notes\|Near Future Plan and Notes]]		[[TMT Thesis Notes\|Near Future Plan and Notes]]

Ty M. Thomson: /* Interests */

Ty M. Thomson — Sat, 19 Aug 2006 00:26:04 GMT

Interests

←Older revision		Revision as of 00:26, 19 August 2006
Line 28:		Line 28:
	==Science==		==Science==
	===Interests===		===Interests===
-	*~~Modeling~~	+	*Computational modeling of signalling pathways
	*Parameter sensitivity/identifiability		*Parameter sensitivity/identifiability
	*Microfluidics		*Microfluidics

Ty M. Thomson: /* Hobbies */

Ty M. Thomson — Mon, 14 Aug 2006 18:40:27 GMT

Hobbies

←Older revision		Revision as of 18:40, 14 August 2006
Line 11:		Line 11:
	*Roller blading		*Roller blading
	*Playing various team sports - hockey, football, softball (if that counts as a 'sport')		*Playing various team sports - hockey, football, softball (if that counts as a 'sport')
-	~~...I must have other hobbies... Am I really that lame?<p>~~	+
	''Things I'm good at that aren't quite hobbies''		''Things I'm good at that aren't quite hobbies''
	*Sleeping		*Sleeping

Ty M. Thomson: /* Thesis Project */

Ty M. Thomson — Fri, 11 Aug 2006 19:58:18 GMT

Thesis Project

←Older revision		Revision as of 19:58, 11 August 2006
Line 38:		Line 38:
	[[TMT Thesis Notes\|Near Future Plan and Notes]]		[[TMT Thesis Notes\|Near Future Plan and Notes]]

		+	===Other===
	[[TMT To Do List]]		[[TMT To Do List]]

Ty M. Thomson: /* Thesis Project */

Ty M. Thomson — Fri, 11 Aug 2006 19:58:00 GMT

Thesis Project

←Older revision		Revision as of 19:58, 11 August 2006
Line 37:		Line 37:

	[[TMT Thesis Notes\|Near Future Plan and Notes]]		[[TMT Thesis Notes\|Near Future Plan and Notes]]
		+
		+	[[TMT To Do List]]

	===Publications===		===Publications===
	*Stewart, I. I., Thomson, T., Figeys, D., and Duewel, H. S. (2003). "The Use of 18O Labeling as a Tool for Proteomic Applications", [http://doi.contentdirections.com/mr/humana.jsp?doi=10.1226/1588293408 Handbook of Proteomic Methods], Edited by P. Michael Conn. Chapter 11, pages 145-179. (Totowa, New Jersey: Humana Press Inc.)		*Stewart, I. I., Thomson, T., Figeys, D., and Duewel, H. S. (2003). "The Use of 18O Labeling as a Tool for Proteomic Applications", [http://doi.contentdirections.com/mr/humana.jsp?doi=10.1226/1588293408 Handbook of Proteomic Methods], Edited by P. Michael Conn. Chapter 11, pages 145-179. (Totowa, New Jersey: Humana Press Inc.)
	*Stewart, I. I., Thomson, T., and Figeys, D. (2001). 18O labeling: a tool for proteomics. Rapid Commun. Mass. Spectrom. 15, 2456-2465 [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11746917 link on Pubmed]		*Stewart, I. I., Thomson, T., and Figeys, D. (2001). 18O labeling: a tool for proteomics. Rapid Commun. Mass. Spectrom. 15, 2456-2465 [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11746917 link on Pubmed]

Ty M. Thomson: /* Hobbies */

Ty M. Thomson — Wed, 03 May 2006 23:34:28 GMT

Hobbies

←Older revision		Revision as of 23:34, 3 May 2006
Line 9:		Line 9:
	*Snowboarding		*Snowboarding
	*Mountain biking		*Mountain biking
		+	*Roller blading
	*Playing various team sports - hockey, football, softball (if that counts as a 'sport')		*Playing various team sports - hockey, football, softball (if that counts as a 'sport')
	...I must have other hobbies... Am I really that lame?<p>		...I must have other hobbies... Am I really that lame?<p>

Ty M. Thomson: /* Bio */

Ty M. Thomson — Sat, 25 Feb 2006 19:47:43 GMT

Bio

←Older revision		Revision as of 19:47, 25 February 2006
Line 1:		Line 1:
	==Personal==		==Personal==
	===Bio===		===Bio===
-	Born in Toronto in 1979. Grew up there, and attended the [http://www.utoronto.ca University of Toronto] (UofT, not to be confused with UT, which is some school in texas I hear). Graduated in 2002 with a BASc (BASc = bachelor of applied science = canadian engineering degree) in Biomedical Engineering from the [http://www.engsci.utoronto.ca/ Engineering Science] program. For 3 summers in undergrad I worked for MDS Proteomics (which changed names to Protana Inc, and was bought out by [http://www.transitiontherapeutics.com/ Transition Therapeutics]). I started grad school at [http://web.mit.edu/ MIT] in [http://web.mit.edu/be Biological Engineering] (BE) in the fall of 2002. In January of 2003 I joined [[Drew Endy]]'s lab. I mainly joined his lab cause he seemed to be the craziest and most outside-of-the-box faculty member in BE. I have been loosely involved in the synthetic biology community here (although my research is not really synth bio), including the sythetic biology working group, and I helped organize [http://syntheticbiology.org/Synthetic_Biology_1.0.html Synthetic Biology 1.0]. I am somehow on the OWW steering committee, despite the fact that I rarely use OWW. I seem to be the skeptic/realist in the group, which is needed 'cause I work with a bunch of optimistic hippies.	+	Born in Toronto in 1979. Grew up there, and attended the [http://www.utoronto.ca University of Toronto] (UofT, not to be confused with UT, which is some school in texas I hear). Graduated in 2002 with a BASc (BASc = bachelor of applied science = canadian engineering degree) in Biomedical Engineering from the [http://www.engsci.utoronto.ca/ Engineering Science] program. For 3 summers in undergrad I worked for MDS Proteomics (which changed names to Protana Inc, and was bought out by [http://www.transitiontherapeutics.com/ Transition Therapeutics]). I started grad school at [http://web.mit.edu/ MIT] in [http://web.mit.edu/be Biological Engineering] (BE) in the fall of 2002. In January of 2003 I joined [[Drew Endy]]'s lab. I mainly joined his lab cause he seemed to be the craziest and most outside-of-the-box faculty member in BE. I have been loosely involved in the synthetic biology community here (although my research is not really synth bio related), including the sythetic biology working group, and I helped organize [http://syntheticbiology.org/Synthetic_Biology_1.0.html Synthetic Biology 1.0]. I am somehow on the OWW steering committee, despite the fact that I rarely use OWW. I seem to be the skeptic/realist in the group, which is needed 'cause I work with a bunch of optimistic hippies.

	[[Image:Ty_and_beer.jpg\|thumb\|right\|Ty on the Sam Adams brewery tour]]		[[Image:Ty_and_beer.jpg\|thumb\|right\|Ty on the Sam Adams brewery tour]]