User:Amirah: Difference between revisions
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Latest revision as of 10:52, 8 May 2007
Initial ideas
- Build a self assembling and degradable scaffold
- Self assembly would get rid of the use of extraneous material to form proper bonds.
- If the material is degrabale, it can degrade leaving the scaffold behind.
- Find coating to cover degradable scaffold that can select for viruses or cells that excrete scaffold material (collagen, calcuim bicarbonate etc.)
- Find coating to bind proteins needed to assemble outer scaffold layer.
- Coating must not alter assembly or binding of scaffold
- Coating must be very selective for protein or cells needed to form outer non-degradable layer of scaffolding.
Experimental Implementation ideas
- Use DNA as scaffold.
- DNA is degradable
- DNA has the ability to be self assembled into 2D structures (Rothemund), and 3D structures (Zhang)
- Build 3D structures from adaptaion of 'raster fill method' (Rothemund)
- Try the assembly of bone structures
- Use bone morphogenic proteins, BMPs (Hosseinkhani)
- Use mesenchymal stem cells, MSC (Hoseeinkhani)
- Improved cell/protein seeding method onto DNA scaffold
- RGD utilized to increase cell adhesion to 3-D scaffolds
- RGD-modified poly(L-lactic acid)
- Use oscillatory flow perfusion instead of static perfusion
- Electrostatic coating of DNA bipolymer (Green)
- RGD utilized to increase cell adhesion to 3-D scaffolds
Papers
- DNA Folding
- Rothemund P.W.K. 2006. Folding DNA to create nanoscale shapes and patterns. Nature. 440:297-302
- Zhang Y., Seeman, N.C. 1994. The construction of a DNA truncated octahedron. J. Am. Chem. Soc. 116: 1661-1669
- Mirkin C. A. 2000. Programming the assembly of two- and three-dimensional architectures with DNA and nanoscale inorganic building blocks.Inorg. Chem. 11: 2258-2272
- Exploration of 3-D scaffold usages and seeding abilities
- Hosseinkhani H., Yamamoto M., Inatsugu Y., Hiraoka Y., Inoue S., Shimokawa H., Tabata Y. 2006. Enhanced ectopic bone formation using a combination of plasmid DNA impregnation into 3-D scaffold and bioreactor perfusion culture. Biomaterials. 27: 1387-1398
- Francoli S. E, Martin I., Sie C. P., Hagg R., Tommasini R., Candrian C., Heberer M., Barbero A. 2007. Growth FActors for Clinical-Scale Expansion of Human Articular Chondrocytes: Relevance for Automated Bioreactor Systems. 13: tentative
- Alvarez-Barreto, J. F., Sikavitsas, V. I. 2007. Improved Mesenchymal Stem Cell Seeding on RGD-Modified Poly(L-lactic acid) Scaffolds using Flow Perfusion. Macromol. Biosci. 5: 579-588.
- DNA nanoparticle seeding technology
- Green, J. J., Chiu E., Leshchiner, E. S., Shi J., Langer R., Anderson D. G.2007. Electrostatic ligand coatings of nanoparticles enable ligand-specific gene delivery to human primary cells.Nano Lett. 4: 874-879.
Module 4 tables
Surface display of scFv fusion? | Binding to gold? | |||
---|---|---|---|---|
Glucose | Galactose | Glucose | Galactose | |
pCT-CON | N | Y | N | N |
pAu1 | N | Y | N | Y |
Temperature | # colonies | |
---|---|---|
pCT-CON | 30 | 0 |
pCT-CON | 25 | 0 |
pAu1 | 30 | 400 |
pAu1 | 25 | 280 |