User:Andrew R. Nager: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
 
(22 intermediate revisions by the same user not shown)
Line 2: Line 2:


==Contact Info==
==Contact Info==
[[Image:OWWEmblem.png|thumb|right|Andrew R. Nager (an artistic interpretation)]]
[[Image:Drew.png#file|thumb|right|]]


*Andrew R. Nager
*Andrew R. Nager
*Stanford University
*Stanford University
*Beckman Center, Rm B109
*Beckman Center, Rm B107
*279 Campus Drive
*279 Campus Drive
*Stanford, CA 94205-5345  
*Stanford, CA 94205-5345  
*[[Special:Emailuser/Andrew R. Nager|Email me through OpenWetWare]]
*[mailto:andrew.r.nager@gmail.com email]


I work in [[Max Nachury]]'s lab at Stanford University.
I work in [http://openwetware.org/wiki/Nachury Max Nachury] 's lab at Stanford University.


==Education==
==Education==
Line 17: Line 17:
* 2012, PhD, Massachusetts Institute of Technology
* 2012, PhD, Massachusetts Institute of Technology
* 2008, BS, Vanderbilt University
* 2008, BS, Vanderbilt University
==Awards==
* 2013, Damon Runyon Fellowship Award [http://www.damonrunyon.org link]
* 2013, Martin and Beate Block early-career physicist [http://www.aspenphys.org/physicists/winter/block.html link]


==Research interests==
==Research interests==
<!-- Feel free to add brief descriptions to your research interests as well -->
<!-- Feel free to add brief descriptions to your research interests as well -->
Biochemistry and biophysics of primary cilia.
Biophysics of primary cilia.


==Publications==
==Publications==


Wohlkever, M.L., <ins>Nager, A.R.</ins>, Baker, T.A., & Sauer, R.T. (2013) Engineering fluorescent protein substrates for the AAA+ Lon protease. '''Protein Engineering and Design''', in press. [http://peds.oxfordjournals.org/content/early/2013/01/28/protein.gzs105.long link]
<ins>Nager, A.R.</ins>, Baker, T.A., & Sauer, R.T. (2013) The kinetics of refolding of partially denatured substrates dictates susceptibility to ClpXP degradation. In submission.
 
• *Stinson, B., <ins>*Nager, A.R.</ins>, *Glynn, S.E., Schmitz, K., Baker, T.A., & Sauer, R.T. (2013) Nucleotide binding and conformational switching in the hexameric ring of a AAA+ machine. '''Cell''', 153(3): 628-39. [http://www.sciencedirect.com/science/article/pii/S0092867413003516 link]
 
• Wohlever, M.L., <ins>Nager, A.R.</ins>, Baker, T.A., & Sauer, R.T. (2013) Engineering fluorescent protein substrates for the AAA+ Lon protease. '''Protein Engineering and Design''', in press. [http://peds.oxfordjournals.org/content/early/2013/01/28/protein.gzs105.long link]


• Glynn, S.E., <ins>Nager, A.R.</ins>, Baker, T.A., & Sauer, R.T. (2012) Dynamic and static components power unfolding in topologically closed rings of a AAA+ proteolytic machine. '''Nature Structure and Molecular Biology''', 19(6): 616-22. [http://www.nature.com/nsmb/journal/v19/n6/full/nsmb.2288.html link]
• Glynn, S.E., <ins>Nager, A.R.</ins>, Baker, T.A., & Sauer, R.T. (2012) Dynamic and static components power unfolding in topologically closed rings of a AAA+ proteolytic machine. '''Nature Structure and Molecular Biology''', 19(6): 616-22. [http://www.nature.com/nsmb/journal/v19/n6/full/nsmb.2288.html link]
Line 34: Line 42:
• Glynn, S.E., Martin, A., <ins>Nager, A.R.</ins>, Baker, T.A., & Sauer, R.T. (2009) Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine. '''Cell''', 139(4): 744-56. [http://www.sciencedirect.com/science/article/pii/S0092867409013075 link]
• Glynn, S.E., Martin, A., <ins>Nager, A.R.</ins>, Baker, T.A., & Sauer, R.T. (2009) Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine. '''Cell''', 139(4): 744-56. [http://www.sciencedirect.com/science/article/pii/S0092867409013075 link]


• Fanning, E., Klimovich, V., & <ins>Nager, A.R.</ins> (2006) A dynamic model for replication protein A (RPA) function in DNA processing pathways. '''Nucleic Acids Research''', 34(15): 4126-37. [http://nar.oxfordjournals.org/content/34/15/4126.long link]
• Fanning, E., Klimovich, V., & <ins>Nager, A.R.</ins> (2006) A dynamic model for replication protein A (RPA) function in DNA processing pathways. '''Nucleic Acids Research''', 34(15): 4126-37. [review article] [http://nar.oxfordjournals.org/content/34/15/4126.long link]
• s
 
- * denotes equal contribution


==Useful links==
==Useful links==
*[[OpenWetWare:Welcome|Introductory tutorial]]
*[[OpenWetWare:Welcome|Introductory tutorial]]
*[[Help|OpenWetWare help pages]]
*[[Help|OpenWetWare help pages]]

Latest revision as of 12:21, 13 May 2013

I am a new member of OpenWetWare!

Contact Info

  • Andrew R. Nager
  • Stanford University
  • Beckman Center, Rm B107
  • 279 Campus Drive
  • Stanford, CA 94205-5345
  • email

I work in Max Nachury 's lab at Stanford University.

Education

  • 2012, PhD, Massachusetts Institute of Technology
  • 2008, BS, Vanderbilt University

Awards

  • 2013, Damon Runyon Fellowship Award link
  • 2013, Martin and Beate Block early-career physicist link

Research interests

Biophysics of primary cilia.

Publications

Nager, A.R., Baker, T.A., & Sauer, R.T. (2013) The kinetics of refolding of partially denatured substrates dictates susceptibility to ClpXP degradation. In submission.

• *Stinson, B., *Nager, A.R., *Glynn, S.E., Schmitz, K., Baker, T.A., & Sauer, R.T. (2013) Nucleotide binding and conformational switching in the hexameric ring of a AAA+ machine. Cell, 153(3): 628-39. link

• Wohlever, M.L., Nager, A.R., Baker, T.A., & Sauer, R.T. (2013) Engineering fluorescent protein substrates for the AAA+ Lon protease. Protein Engineering and Design, in press. link

• Glynn, S.E., Nager, A.R., Baker, T.A., & Sauer, R.T. (2012) Dynamic and static components power unfolding in topologically closed rings of a AAA+ proteolytic machine. Nature Structure and Molecular Biology, 19(6): 616-22. link

Nager, A.R., Baker, T.A., & Sauer, R.T. (2011) Stepwise unfolding of a beta barrel protein by the AAA+ ClpXP protease. Journal of Molecular Biology, 413(1):4-16. link

• Gaidukov, L., Nager, A.R., Xu, S., Penman, M., & Krieger, M. (2011) Glycine dimerization motif in the N-terminal transmembrane domain of the high density lipoprotein receptor SR-BI required for normal receptor oligomerization and lipid transport. Journal of Biological Chemistry, 286(21): 18452-64. link

• Glynn, S.E., Martin, A., Nager, A.R., Baker, T.A., & Sauer, R.T. (2009) Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine. Cell, 139(4): 744-56. link

• Fanning, E., Klimovich, V., & Nager, A.R. (2006) A dynamic model for replication protein A (RPA) function in DNA processing pathways. Nucleic Acids Research, 34(15): 4126-37. [review article] link

- * denotes equal contribution

Useful links