User:Darek Kedra: Difference between revisions
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== Darek Kedra == | == Darek Kedra == | ||
[[Image: | [[Image:DK Marrakesh2007small.png|thumb|right|Darek Kedra (away from a computer)]] | ||
Hi, my name is Darek Kedra, | Hi, my name is Darek Kedra, I am currently working as a bioinformatician at [http://www.crg.es/ Center for Genomic Regulation (CRG)] in Barcelona, Spain. | ||
You can [[Special:Emailuser/Darek Kedra|email me through OpenWetWare]]. | |||
==Maintained pages == | |||
===Recent courses=== | |||
'''Introduction to NGS file formats and IGV''' | |||
[http://events.embo.org/14-ht-ngs/ High-throughput next generation sequencing applied to infectious diseases] | |||
Tunis, Tunisia, September 2014 | |||
*[[Wikiomics:EMBO_Tunis_1]] NGS, tips for genome sequencing, file formats | |||
*[[Wikiomics:EMBO_Tunis_2]] IGV, DNA mapping, GATK SNP calling | |||
'''Introduction to bioinformatics for Next Generation Sequencing''' | |||
[http://www.gene2farm.eu/index.php/g2fws2013 Gene2Farm WinterSchool]] | |||
Piacenza, Italy November 2013 | |||
* [[Wikiomics:WinterSchool_day1]] Linux, FASTQ, GFF | |||
* [[Wikiomics:WinterSchool_day2]] DNA mapping, BAM processing, RNASeq | |||
===Varia=== | |||
Pages below are not up to date, but I plan to maintain them given a time. | |||
* [[Wikiomics:RNA-Seq]] | |||
* [[Wikiomics:Genome_aligners]] | |||
* [[Wikiomics:Ensembl_local_install]] | |||
* [[Wikiomics:Ensembl_local_install_draft]] | |||
* [[Wikiomics:Ensembl_tutorials]] | |||
* [[Wikiomics:Bioinfo_tutorial]] | |||
* [[Wikiomics:BLAST_tutorial]] | |||
* [[Wikiomics:Repeat_finding]] | |||
* [[Wikiomics:Sequence motifs]] | |||
* [[Wikiomics:Pathway_analysis]] | |||
* [[Wikiomics:Protein mass spectrometry]] | |||
* [[Wikiomics:Bioinformatics courses(external)]] | |||
* [[Wikiomics:SRS_tutorials]] | |||
* [[Wikiomics:ChIP-chip]] | |||
* [[Wikiomics:Staden]] | |||
* [[Wikiomics:DNA_sequencing]] | |||
* [[Wikiomics:Cloning_in_silico]] | |||
* [[Wikiomics:Genome_annotation]] | |||
* [[Wikiomics:Mutation/SNP_detection]] | |||
* [[Wikiomics:NMR_Toolbox]] | |||
* [[Wikiomics:Crystallography_toolbox]] | |||
* [[Wikiomics:Docking_toolbox]] | |||
* [[Wikiomics:PSI-BLAST]] | |||
Revision as of 03:41, 18 September 2014
Darek Kedra
Hi, my name is Darek Kedra, I am currently working as a bioinformatician at Center for Genomic Regulation (CRG) in Barcelona, Spain.
You can email me through OpenWetWare.
Maintained pages
Recent courses
Introduction to NGS file formats and IGV
High-throughput next generation sequencing applied to infectious diseases
Tunis, Tunisia, September 2014
- Wikiomics:EMBO_Tunis_1 NGS, tips for genome sequencing, file formats
- Wikiomics:EMBO_Tunis_2 IGV, DNA mapping, GATK SNP calling
Introduction to bioinformatics for Next Generation Sequencing
Piacenza, Italy November 2013
- Wikiomics:WinterSchool_day1 Linux, FASTQ, GFF
- Wikiomics:WinterSchool_day2 DNA mapping, BAM processing, RNASeq
Varia
Pages below are not up to date, but I plan to maintain them given a time.
- Wikiomics:Bioinfo_tutorial
- Wikiomics:BLAST_tutorial
- Wikiomics:Repeat_finding
- Wikiomics:Sequence motifs
- Wikiomics:Pathway_analysis
- Wikiomics:Protein mass spectrometry
- Wikiomics:Bioinformatics courses(external)
- Wikiomics:SRS_tutorials
- Wikiomics:ChIP-chip
- Wikiomics:Staden
- Wikiomics:DNA_sequencing
- Wikiomics:Cloning_in_silico
- Wikiomics:Genome_annotation
- Wikiomics:Mutation/SNP_detection
