User:Darek Kedra: Difference between revisions

Revision as of 03:41, 18 September 2014

Hi, my name is Darek Kedra, I am currently working as a bioinformatician at Center for Genomic Regulation (CRG) in Barcelona, Spain.

Introduction to NGS file formats and IGV

Tunis, Tunisia, September 2014

Introduction to bioinformatics for Next Generation Sequencing

Piacenza, Italy November 2013

Pages below are not up to date, but I plan to maintain them given a time.

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 You can [[Special:Emailuser/Darek Kedra|email me through OpenWetWare]].
+==Maintained pages ==
+===Recent courses===
+'''Introduction to NGS file formats and IGV'''
+[http://events.embo.org/14-ht-ngs/ High-throughput next generation sequencing applied to infectious diseases]
+Tunis, Tunisia, September 2014
+*[[Wikiomics:EMBO_Tunis_1]] NGS, tips for genome sequencing, file formats
+*[[Wikiomics:EMBO_Tunis_2]] IGV, DNA mapping, GATK SNP calling
+'''Introduction to bioinformatics for Next Generation Sequencing'''
+[http://www.gene2farm.eu/index.php/g2fws2013 Gene2Farm WinterSchool]]
+Piacenza, Italy November 2013
+* [[Wikiomics:WinterSchool_day1]] Linux, FASTQ, GFF
+* [[Wikiomics:WinterSchool_day2]] DNA mapping, BAM processing, RNASeq
+===Varia===
+Pages below are not up to date, but I plan to maintain them given a time.
+* [[Wikiomics:RNA-Seq]]
+* [[Wikiomics:Genome_aligners]]
+* [[Wikiomics:Ensembl_local_install]]
+* [[Wikiomics:Ensembl_local_install_draft]]
+* [[Wikiomics:Ensembl_tutorials]]
-==Maintained pages ==
 * [[Wikiomics:Bioinfo_tutorial]]
 * [[Wikiomics:BLAST_tutorial]]
 * [[Wikiomics:Repeat_finding]]
@@ Line 20: / Line 48: @@
 * [[Wikiomics:Bioinformatics courses(external)]]
 * [[Wikiomics:SRS_tutorials]]
-* [[Wikiomics:Ensembl_tutorials]]
 * [[Wikiomics:ChIP-chip]]
 * [[Wikiomics:Staden]]