User:Domenico Bellomo/CV: Difference between revisions
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German Basic Reading<br /><br /></td></tr></table> | German Basic Reading<br /><br /></td></tr></table> | ||
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<span class="style4">Hobbies</span></span> | |||
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Reading all kind of popular science books, novels, poetry and techno-thrillers; theater;<br /> | |||
music; traveling; playing soccer, swimming, table-tennis<br /></td></tr></table> | |||
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<span class="style4">Publications </span></span> | |||
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Systems and Synthetic Biology </p><br /> | Systems and Synthetic Biology </p><br /> | ||
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on multi-elitism and Lamarckian mutation”, Proceedings of 2002 IEEE International<br /> | on multi-elitism and Lamarckian mutation”, Proceedings of 2002 IEEE International<br /> | ||
Conference on Systems, Man and Cybernetics, Vol. 4 , 6-9 Oct. 2002.<br /> | Conference on Systems, Man and Cybernetics, Vol. 4 , 6-9 Oct. 2002.<br /> | ||
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<p> <span class="style4"> <img src="left_bar.jpg" alt="" />References </span></p> | <p> <span class="style4"> <img src="left_bar.jpg" alt="" />References </span></p> | ||
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Revision as of 02:52, 4 November 2009
<html xmlns="http://www.w3.org/1999/xhtml"> <head> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> <title>Untitled Document</title> <style type="text/css"> <!-- .style1 { font-family: LMSans17-Regular; font-size: 34pt; } .style2 { font-family: LMRomanSlant10-Regular; font-size: 11pt; color: #4080C0; } .style3 { font-family: LMSans17-Oblique; font-size: 17pt; color: #5A5A5A; font-style: italic; } .style4 { font-family: Geneva, Arial, Helvetica, sans-serif; font-size: 17pt; color: #3366A6; font-weight: normal; } --> </style> </head> <body> <table width="100%"><tr><td align="left"><p><span class="style1">Domenico Bellomo</span><br />
<span class="style3">Post-doc</span><br /></p></td>
<td align="right"><p class="style2">
Mekelweg 4<br /> 2628 CD Delft (NL)<br /> H +31 (0)64 62 17008<br /> T +31 (0)15 27 82378<br /> u +31 (0)15 27 81843<br /> B d.bellomo@tudelft.nl<br /> </p></td>
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<table width="100%" cellspacing="10"> <tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Personal Information</span></span> </td></tr> <tr><td align="right"> Date of Birth <br /> Place of Birth <br /> Nationality <br /> Marital Status<br /> Home address <br /> e-mail address <br />
</td><td align="left">
May 5th, 1975<br /> Bari, Italy<br /> Italian<br /> Married<br /> Javastraat 65, 2585 AG Den Haag (NL)<br /> domenico.bellomo@gmail.com<br /> </td></tr></table> <table width="100%" cellspacing="10"> <tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Research Interests </span></span> </td></tr> <tr><td align="right"><br />
</td><td align="justify">
<p align="justify"> To gain a better understanding of the dynamics of the biochemical networks within the cell, we need to perturb the individual components of such networks, and to measure in vivo the corresponding response. I see synthetic biology primarily as a tool that can help in this effort to study the cell “from the inside”; and secondarily as a tool to re-engineer cellular functionalities according to some desired specifications. Two crucial steps in this direction are: (i) the design and experimental characterization of libraries of standard building blocks like switches, sensors, logic gates, oscillators, automata; (ii) and the development of methods for the analysis and robust design of such devices.<br /> The latter issues are well posed only within an evolutionary perspective.<br /></p> </td></tr></table></p> <table width="100%" cellspacing="10"> <tr><td align="right" width="15%"bgcolor="#4080C0" > </td> <td> <span class="style4">Work Experience </span></span> </td></tr> <tr><td align="right" valign="top"> Jun 06–Present
</td><td align="left">
<strong>Post-doc</strong>, <em>Delft Bioinformatics Lab and Bioprocess Technology Group, Delft University<br /> of Technology,</em> Delft, The Netherlands.<br /> <u>Research</u>: reconstruction of metabolic networks; relation between structure and dynamics in biochemical networks; analysis, design and standardization of synthetic networks.<br /> <u>Other activities:</u> initiator and supervisor of 2008 and 2009 TUDelft iGEM (International Genetically Engineered Machine competition) teams; initiator and organizer of the biweekly NO-MEC meetings on metabolic networks modeling. </td></tr> <tr><td align="right" valign="top"> Apr 05–May 06
</td>
<td align="left"> <strong>R&D engineer</strong><em>, IHC systems B.V.</em> , Sliedrecht, The Netherlands.<br /> <u>Tasks</u>: design of stochastic filters for on-line parameter estimation (e.g. Kalman filters, particle filters, etc.).<br /> <u>Completed projects:</u> grain-size estimation in water slurry mixture, anchor position estimation, overflow losses estimation, swing speed control.<br /> </td></tr> </table>
<table width="100%" cellspacing="10"> <tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Education </span></span> </td></tr> <tr><td align="right" valign="top"> Jan 01–Mar 05
</td><td align="left">
<strong>PhD in Electrical Engineering</strong>, <em>, Politecnico di Bari</em>, Bari, Italy.<br /> <u>Main topic:</u> Lyapunov based design of adaptive fuzzy controllers for nonlinear servo-drives.<br /> <u>Secondary project:</u> design of a decision support system for the optimization of mechanical ventilation settings, in patients affected by acute respiratory syndrome </td></tr> <tr><td align="right" valign="top"> Oct 02–Oct 03
</td>
<td align="left"> <strong>Visiting student</strong><em>,Delft Center for Systems and Control, Delft University of Technology, </em> , Delft, The Netherlands.<br /> <u>Research subject:</u>on line identification of fuzzy models.<br /> </td></tr> <tr><td align="right" valign="top"> Sep 94–Jul 01
</td>
<td align="left"> <strong>Laurea (BA & MSc) in Electrical Engineering</strong><em>, Politecnico di Bari,</em> Bari, Italy.<br /> <u>Thesis:</u>Intelligent Control of Nonlinear Systems: a Fuzzy Logic Based Approach<br /> Graduation mark: 110/110 cum laude </td></tr> <tr><td align="right" valign="top"> Sep 91–Aug 94
</td>
<td align="left"> <strong>High School,</strong><em>Scientific Lyceum G. Salvemini,</em> Bari, Italy.<br /> <u>Thesis:</u>Intelligent Control of Nonlinear Systems: a Fuzzy Logic Based Approach<br /> Graduation mark: 60/60 </td></tr> </table> <table width="100%" cellspacing="10"> <tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Teaching Assistant Experience </span></span> </td></tr> <tr><td align="right"><br />
</td><td align="left">
<li>Functional Genomics & Systems Biology (MSc-level), 2009</li> <li>Advanced course in Bioinformatics (postgraduate level), 2008 </li> <li>Computer-Controlled Systems (MSc-level), 2002, 2003</li>
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<table width="100%" cellspacing="10">
<tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Recently supervised MSc projects </span></span> </td></tr> <tr><td align="right"><br />
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<li>B. van den Berg, (supervisors: D. Bellomo, M.J.T. Reinders), “Automated design of synthetic biological systems using standard parts”, Nov 2008- present.</li> <li>P. van Nes (supervisors: D. Bellomo, D. de Ridder and M.J.T. Reinders), “Inferring dynamic properties of metabolic networks from their structural information”, Delft University of Technology, April 4 2008.</li> <li>J. Yong-A-Poi (supervisors: E.P. van Someren, D. Bellomo and M.J.T. Reinders), “Adaptive least absolute regression network analysis improves genetic network reconstruction by employing prior knowledge”, Delft University of Technology, March 28 2008.</li>
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<table width="100%" cellspacing="10"> <tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Selected postgraduate courses </span></span> </td></tr> <tr><td align="right"><br />
</td><td align="left">
<li>² 5th Cytoscape public symposium and developer retreat, Amsterdam, The Netherlands, Nov 2007.</li> <li>Advanced course on applied genomics of industrial fermentation, Wageningen, The Netherlands, Oct 2006</li> <li>Genome access course, Cold Spring Harbor Laboratory, New York, Nov 2005.</li>
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<table width="100%" cellspacing="10"> <tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Computer skills </span></span> </td></tr> <tr><td align="right"><br />
</td><td align="left">
Tools: Latex, Office Packages MATLAB, COPASI, CellNetAnalyzer,<br /> Genedata, LabVIEW, dSPACE<br /> Languages: C, C++ Platforms Windows, Linux<br /> Wet-Lab literacy:<br /> Plasmid mini-prep, restriction and ligation (Bio-Brick standards), competent cells transformation,<br /> gel electrophoresis, PCR.<br /></td></tr></table>
<table width="100%" cellspacing="10"> <tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Languages</span></span> </td></tr> <tr><td align="right"><br />
</td><td align="left">
Italian Fluent My native language.<br /> English Fluent Speaking, reading, and writing.<br /> Dutch Intermediate Delftse methode beginners course: 94/100<br /> German Basic Reading<br /><br /></td></tr></table>
<table width="100%" cellspacing="10"> <tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Hobbies</span></span> </td></tr> <tr><td align="right"><br />
</td><td align="left">
Reading all kind of popular science books, novels, poetry and techno-thrillers; theater;<br /> music; traveling; playing soccer, swimming, table-tennis<br /></td></tr></table>
<table width="100%" cellspacing="10"> <tr><td align="right" width="15%" bgcolor="#4080C0"></td> <td> <span class="style4">Publications </span></span> </td></tr> <tr><td align="right"><br />
</td><td align="left">
<p> Systems and Synthetic Biology </p><br /> <p> [1b] O. M. J. A Stassen, R. J. J. Jorna, B. A. van den Berg, R. Haghi, F. Ehtemam, S. M.<br /> Flipse, J. A Kiers, M. J. L de Groot, I. E. Nikerel, D. Bellomo,“Toward tunable RNA<br /> thermo-switches for temperature dependent gene expression”, to be submitted.<br /> [2b] F. Menolascina, D. Bellomo, T. Maiwald, V. Bevilacqua, C. Ciminelli, A. Paradiso, and<br /> S. Tommasi, “Developing optimal input design strategies in cancer systems biology with<br /> applications to micro-fluidic device engineering”, BMC Bioinformatics 2009, in press<br /> [3b] P. van Nes, D. Bellomo, M.J.T. Reinders and D. de Ridder, “Stability from structure:<br /> metabolic networks are unlike other biological networks”, EURASIP Journal on<br /> Bioinformatics and Systems Biology, vol. 2009, pp. Article ID 630695, 2009.<br /> [4b] D. Bellomo, D. de Ridder, S. Rossell, P.J.T. Verheijen, M.J.T. Reinders and J.J.<br /> Heijnen, “Identifying the regulatory structure of metabolic networks: a constrained<br /> optimization approach”, Proceedings of the 14th annual conference of the Advanced<br /> School for Computing and Imaging, pp. 250-257, 2008.<br /> [5b] D. Bellomo, P. van Nes, M.J.T. Reinders and D. de Ridder, “Stability cannot be derived<br /> from local structure in biochemical network”, Proceedings of the 3rd international<br /> conference on bio-inspired models of network, information, and computing systems,<br /> ICST, Gent, Belgium, 2008.<br /> [6b] D. Bellomo, D. de Ridder, J.J. Heijnen, M. J.T. Reinders, W. A. van Winden, P.J.T.<br /> Verheijen, “Identifiability of metabolic networks in pulse experiments”, Proceedings of<br /> the 13th annual conference of the Advanced School for Computing and Imaging, 2007.<br /> </p> <p> Systems and Control Theory</p><br /> <p> [1c] D. Bellomo, D. Naso, R. Babuška, “Adaptive fuzzy control of a non-linear servo-drive:<br /> theory and experimental results”, Engineering Applications of Artificial Intelligence, vol.<br /> 21, no. 6, September 2008.<br /> [2c] D. Bellomo, Babuška R., Naso, D., “Adaptive fuzzy control for speed-reference tracking<br /> in nonlinear servo drives”, Proceeding of 14th IFAC Symposium on System Identification,<br /> March 29-31, 2006, Newcastle, Australia.<br /> [3c] D. Bellomo, Naso, D., Babuška R., “Experimental comparison of adaptive fuzzy controllers”,<br /> Proceeding of FuzzIEEE 2005, Conference on Fuzzy systems , May 22-25,<br /> Reno, Nevada, USA.<br /> [4c] D. Bellomo, D. Naso, B. Turchiano, R. Babuška, “Composite adaptation in adaptive<br /> fuzzy control”, Proceedings of 16th IFAC World Congress, Prague, Czech Republic, July<br /> 4 to July 8, 2005<br /> [5c] D. Bellomo, D. Naso, R. Babuška, “Parameter convergence in adaptive fuzzy control”,<br /> Proceedings of the 1st International Conference on Informatics in Control, Automation<br /> and Robotics, vol.2, 25-28 August 2004, Setubal, Portugal.<br /> [6c] D. Bellomo, D. Naso, B. Turchiano, “Improving genetic algorithms: an approach based<br /> on multi-elitism and Lamarckian mutation”, Proceedings of 2002 IEEE International<br /> Conference on Systems, Man and Cybernetics, Vol. 4 , 6-9 Oct. 2002.<br /> </p></td></tr></table>
<p> <span class="style4"> <img src="left_bar.jpg" alt="" />References </span></p> <br /> <p> Prof. Dr. Ir. Marcel J.T. Reinders<br /> Delft Bioinformatics Lab Phone:+31 (0)15 27 86424<br /> Delft University of Technology Fax: +31 (0)15 27 81843<br /> Mekelweg 4, 2628 CD Delft, NL Email: M.J.T.Reinders [AT] tudelft.nl<br /> Prof. Dr. Han de Winde<br /> Chairman of the Department of Biotechnology Phone:+31 (0)15 27 86659<br /> Delft University of Technology<br /> Julianalaan 67, 2628 BC Delft, NL Email: j.h.dewinde [AT] tudelft.nl<br /> Prof. Dr. Ir. Sef Heijnen<br /> Bio-process Technology Group Phone:+31 (0)15 278 2341<br /> Delft University of Technology<br /> Julianalaan 67, 2628 BC Delft, NL Email: J.J.Heijnen [AT] tudelft.nl<br /> Prof. Dr. Robert Babuška<br /> Delft Center for Systems and Control Phone:+31 (0)15 27 85117<br /> Delft University of Technology Fax: +31 (0)15 27 86679<br /> Mekelweg 2, 2628 CD Delft, NL Email: r.babuska [AT] dcsc.tudelft.nl<br /> </p> <p> Updated<br /> October 22, 2009<br /> </p>
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