User:JCAnderson - Revision history

JCAnderson: /* Publications and Conference Papers */

2013-03-05T02:13:04Z

Publications and Conference Papers

←Older revision		Revision as of 02:13, 5 March 2013
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	===Publications and Conference Papers===		===Publications and Conference Papers===
	<!--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->		<!--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->
-	~~<!--~~#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" ~~Proc~~. ~~Natl. Acad. Sci~~. (~~submitted~~)~~-->~~	+	#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" ACS Syn. Biol. (in press)
	#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. 7(1):2, 2013.		#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. 7(1):2, 2013.
	#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)		#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)

JCAnderson: /* Publications and Conference Papers */

2013-02-04T15:08:35Z

Publications and Conference Papers

←Older revision		Revision as of 15:08, 4 February 2013
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	<!--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->		<!--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->
	<!--#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)-->		<!--#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)-->
-	#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (~~in press~~)	+	#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. 7(1):2, 2013.
	#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)		#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)
	#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.		#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.

JCAnderson: /* Publications and Conference Papers */

2013-01-09T22:45:17Z

Publications and Conference Papers

←Older revision		Revision as of 22:45, 9 January 2013
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	<!--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->		<!--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->
	<!--#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)-->		<!--#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)-->
-	~~<!--~~#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (~~submitted~~)~~-->~~	+	#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (in press)
-	#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)~~-->~~	+	#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)
	#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.		#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.
	#Kittleson, J. T., Wu, G. C., Anderson, J. C. "Successes and failures in modular genetic engineering," Curr. Opin. Chem. Biol. 16(3-4):329-36, 2012.		#Kittleson, J. T., Wu, G. C., Anderson, J. C. "Successes and failures in modular genetic engineering," Curr. Opin. Chem. Biol. 16(3-4):329-36, 2012.

JCAnderson: /* Publications and Conference Papers */

2013-01-09T22:01:52Z

Publications and Conference Papers

←Older revision		Revision as of 22:01, 9 January 2013
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	<!--#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)-->		<!--#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)-->
	<!--#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)-->		<!--#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)-->
-	~~<!--~~#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)-->	+	#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)-->
	#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.		#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.
	#Kittleson, J. T., Wu, G. C., Anderson, J. C. "Successes and failures in modular genetic engineering," Curr. Opin. Chem. Biol. 16(3-4):329-36, 2012.		#Kittleson, J. T., Wu, G. C., Anderson, J. C. "Successes and failures in modular genetic engineering," Curr. Opin. Chem. Biol. 16(3-4):329-36, 2012.

JCAnderson: /* Honors and Awards */

2012-09-17T00:37:48Z

Honors and Awards

←Older revision		Revision as of 00:37, 17 September 2012
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	===Honors and Awards===		===Honors and Awards===
		+	*2011 The International Genetically Engineered Machine (iGEM) Competition (Instructor):
		+	**Best Poster, Americas
		+	Best Poster, Americas
	*2009 The International Genetically Engineered Machine (iGEM) Competition (Instructor):		*2009 The International Genetically Engineered Machine (iGEM) Competition (Instructor):
	**Best software award for tools team		**Best software award for tools team

JCAnderson: /* Publications and Conference Papers */

2012-09-15T17:23:27Z

Publications and Conference Papers

←Older revision		Revision as of 17:23, 15 September 2012
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	===Publications and Conference Papers===		===Publications and Conference Papers===
	<!--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->		<!--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->
-	#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)	+	<!--#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)-->
-	#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)	+	<!--#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)-->
-	#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)	+	<!--#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)-->
	#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.		#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.
	#Kittleson, J. T., Wu, G. C., Anderson, J. C. "Successes and failures in modular genetic engineering," Curr. Opin. Chem. Biol. 16(3-4):329-36, 2012.		#Kittleson, J. T., Wu, G. C., Anderson, J. C. "Successes and failures in modular genetic engineering," Curr. Opin. Chem. Biol. 16(3-4):329-36, 2012.

JCAnderson: /* Publications and Conference Papers */

2012-09-15T17:22:27Z

Publications and Conference Papers

←Older revision		Revision as of 17:22, 15 September 2012
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	===Publications and Conference Papers===		===Publications and Conference Papers===
-	<--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->	+	<!--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->
	#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)		#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)
	#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)		#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)

JCAnderson: /* Publications and Conference Papers */

2012-09-15T17:21:36Z

Publications and Conference Papers

←Older revision		Revision as of 17:21, 15 September 2012
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	===Publications and Conference Papers===		===Publications and Conference Papers===
-	#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)	+	<--#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->
	#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)		#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)
	#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)		#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)

JCAnderson: /* Publications and Conference Papers */

2012-09-15T17:18:55Z

Publications and Conference Papers

←Older revision		Revision as of 17:18, 15 September 2012
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	===Publications and Conference Papers===		===Publications and Conference Papers===
-	~~<!--~~Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)~~-->~~	+	#Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)
-	~~<!--~~Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)~~-->~~	+	#Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)
-	~~<!--~~Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)~~-->~~	+	#Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)
	#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)		#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)
	#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.		#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.

JCAnderson at 17:18, 15 September 2012

2012-09-15T17:18:10Z

←Older revision		Revision as of 17:18, 15 September 2012
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	===Publications and Conference Papers===		===Publications and Conference Papers===
-	<!--Modular Design of a Synthetic Payload Delivery Device-->	+	<!--Oberortner, E., Bhatia, S., Densmore, D., Anderson, J. C. "Clotho 3.0: A Pattern-based Story on the Design of Clotho's New Architecture" 19th Conference on Pattern Languages of Programs, 2012. (accepted)-->
-	<!--2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts~~-->~~	+	<!--Huh, J., Kittleson, J. T., Arkin, A. P., Anderson, J. C. "Modular Design of a Synthetic Payload Delivery Device" Proc. Natl. Acad. Sci. (submitted)-->
-	~~<!--Pathway Synthesis using the Act Ontology~~-->	+	<!--Leguia, M., Brophy, J., Densmore, D., Asante, A., Anderson, J. C. "2ab assembly: a methodology for automatable, high-throughput assembly of standard biological parts" J. Biol. Eng. (submitted)-->
	#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)		#Kittleson, J. T., DeLoache, W., Cheng, H-Y. "Scalable Plasmid Transfer using Engineered P1-based Phagemids," ACS Syn. Biol. (in press)
		+	#Srivastava, S., Kotker, J., Hamilton, S., Ruan, P., Tsui, J., Anderson, J. C., Bodik, R., Seshia, S. A. "Pathway Synthesis using the Act Ontology", Fourth International Workshop on Bio-Design Automation (IWBDA) 2012, San Francisco, June 2012.
	#Kittleson, J. T., Wu, G. C., Anderson, J. C. "Successes and failures in modular genetic engineering," Curr. Opin. Chem. Biol. 16(3-4):329-36, 2012.		#Kittleson, J. T., Wu, G. C., Anderson, J. C. "Successes and failures in modular genetic engineering," Curr. Opin. Chem. Biol. 16(3-4):329-36, 2012.
	#Kittleson, J. T., Cheung, S., Anderson, J. C. "Rapid optimization of gene dosage in E. coli using DIAL strains," J. Biol. Eng. 5(1):10, 2011		#Kittleson, J. T., Cheung, S., Anderson, J. C. "Rapid optimization of gene dosage in E. coli using DIAL strains," J. Biol. Eng. 5(1):10, 2011