User:Jarle Pahr/COBRA

CobraPy: https://groups.google.com/forum/#!forum/cobra-pie

http://cobramethods.wikidot.com/methods

http://systemsbiology.ucsd.edu/cobra-methods

COBRA review. Articles using COBRA methods: http://sbrg.ucsd.edu/cobra-predictions-app/

• Includes world map of articles and highlighting of "key papers".
• Lists type of comparison to experimental data.

http://systemsbiology.ucsd.edu/Publications/Books/SB1Lectureslides

Comprehensive catalog of COBRA methods: http://cobramethods.wikidot.com/

rBioNet: A COBRA toolbox extension for reconstructing high-quality biochemical networks. http://www.ncbi.nlm.nih.gov/pubmed/21596791

COBRA Toolbox

Load model:

 model = readCbModel()

Optimize model:

result = optimizeCbModel(model)