User:Jarle Pahr/Hardware: Difference between revisions
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http://en.wikipedia.org/wiki/Arduino | http://en.wikipedia.org/wiki/Arduino | ||
'''Official resources:''' | |||
http://arduino.cc/ | http://arduino.cc/ | ||
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http://arduino.cc/en/Reference/HomePage | http://arduino.cc/en/Reference/HomePage | ||
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See also http://sanguino.cc/ | See also http://sanguino.cc/ | ||
http://blog.makezine.com/arduino/ | http://blog.makezine.com/arduino/ | ||
http://www.arduinonorway.org/forum/ | |||
SimDuino, an iPad Arduino simulator: http://arduino.cc/forum/index.php/topic,107629.0.html | SimDuino, an iPad Arduino simulator: http://arduino.cc/forum/index.php/topic,107629.0.html |
Revision as of 05:58, 24 April 2013
Notes on hardware of interest:
http://opensourceecology.org/wiki-gvcs.php
Tablets
Nexus 7:
http://en.wikipedia.org/wiki/Nexus_7
- 19,8 x 12,0 cm
- 340 g
- 1 GB RAM
- 1,2 Ghz quad-core CPU
Pris: ~ 2000 NOK (uten 3G)
Nexus 10:
- http://en.wikipedia.org/wiki/Nexus_10
- http://www.google.com/nexus/10/
- 26,4 x 17,8 cm
- 2 GB RAM
- 1,7 Ghz dual-core CPU
- 603 g
iPad 2:
- 24,12 x 18,57 cm
http://www.reddit.com/r/Nexus10/comments/16c4kd/nexus_10_owners_would_you_buy_your_nexus_again/
http://www.diskusjon.no/index.php?showtopic=1467381&st=60
http://www.amazon.com/Google-Nexus-10-Wi-Fi-only/dp/B00ACVHKSC
Pris: ~ 3600 NOK
Lab equipment
OpenPCR:
POGO Oligonucleotide synthesizer: http://www.bioinformatics.org/pogo/
DIY scanning Electron microscope: http://benkrasnow.blogspot.nl/2011/03/diy-scanning-electron-microscope.html
DIY Bioprinter: http://www.instructables.com/id/DIY-BioPrinter/?ALLSTEPS
Tekla labs - research grade DIY instructables: http://guides.teklalabs.org/
Automated fluid handling
http://forums.reprap.org/read.php?194,32936
http://88proof.com/synthetic_biology/blog/archives/407
http://unterbahn.com/2010/02/diy-lego-liquid-handling-robot-for-gene-synthesis/
http://2009.igem.org/Team:Washington-Software
http://openwetware.org/wiki/Mike_Barnkob:Projects/Liquid_handling_robot
https://groups.google.com/forum/?fromgroups=#!topic/diybio/D5-eOnJjw_A
https://groups.google.com/forum/#!topic/diybio/Cp8n7p3kPMc
https://forum.sparkfun.com/viewtopic.php?f=14&t=23561
http://88proof.com/synthetic_biology/blog/archives/461
www.andrewalliance.com
http://forums.reprap.org/read.php?1,11439,11494
https://github.com/delinquentme/LH001#readme
http://hackteria.org/wiki/index.php/DIY_Micro_Dispensing_and_Bio_Printing
Microfluidics
http://hackteria.org/wiki/index.php/DIY_Microfluidics
http://wetpong.net/wetpong/?page_id=115
http://fab.cba.mit.edu/classes/S62.12/people/tsai.liz/index.html
Electroporation
http://biotech.wku.edu/online_manual/Bio-Rad%20Gene%20Pulser%20II.pdf
The BioRad Gene Pulser II electroporation system requires the Gene Pulser II Core unit and an acessory unit (Pulse Controller II or Capacitance Extander) The BioRad Gene Pulser II core unit (110 V) has been spotted on sale for 400 USD on EBay: http://www.ebay.com/itm/Bio-Rad-BioRad-Gene-Pulser-II-2-Apparatus-340BR-/290868541376?pt=LH_DefaultDomain_0&hash=item43b91db7c0 Shipping (~200 USD) and import tax would bring total cost to ~ 4500 NOK.
Pulse Controller spotted for ~200 USD:
Recent development in low-cost electroporation: http://www.eurekalert.org/pub_releases/2013-02/f-sf-asb020713.php Appears to be only usable for electroporation of adherent cells.
See also http://www.ncbi.nlm.nih.gov/pubmed/1368271
List price for BioRad MicroPulser electroporator is 20 000 NOK: http://www.bio-rad.com/prd/en/NO/adirect/biorad?ts=1&cmd=BRCatgProductDetail&vertical=LSR&catID=83527990-34fb-4b33-b955-ca53b57bf8b9
Processors
http://en.wikipedia.org/wiki/ARM_architecture
- Used in majority of smartphones.
http://en.wikipedia.org/wiki/X86
Electronics
http://en.wikipedia.org/wiki/Bug_Labs
Udoo: http://www.kickstarter.com/projects/435742530/udoo-android-linux-arduino-in-a-tiny-single-board
http://blog.makezine.com/2013/04/15/arduino-uno-vs-beaglebone-vs-raspberry-pi/
Arduino
Single-board microcontroller based on Atmel's ATMEGA8 and ATMEGA168 AVR microcontrollers. Arduino is a fork from the Wiring development platform.
http://en.wikipedia.org/wiki/Arduino
Official resources:
Introduction: http://www.arduino.cc/en/Guide/Introduction
FAQ: http://arduino.cc/en/Main/FAQ
Foundations: http://arduino.cc/en/Tutorial/Foundations
Language reference: http://arduino.cc/en/Reference/HomePage
Arduino products: http://arduino.cc/en/Main/Products
Distributors: http://arduino.cc/en/Main/Products
Tutorials: http://arduino.cc/en/Tutorial/HomePage
Getting started: http://arduino.cc/en/Guide/HomePage
Software: http://arduino.cc/en/main/software
- Runs on Windows, Macintosh OSX, and Linux operating systems.
http://arduino.cc/en/Reference/HomePage
See also http://sanguino.cc/
http://blog.makezine.com/arduino/
http://www.arduinonorway.org/forum/
SimDuino, an iPad Arduino simulator: http://arduino.cc/forum/index.php/topic,107629.0.html
Concepts:
- Sketch: The term for an Arduino program. A unit of code that is uploaded and run on an Arduino board. Sketches are saved with the file extension .ino.
- Shields: Printed circuit expansion boards called "shields" can be plugged into the Arduino pin-headers to provide specialized functions such as GPS, ethernet, LCD display etc.
Programming:
http://arduino.cc/en/Guide/Environment
The Arduino programming environment is based on the Processing programming environment (http://www.processing.org/).
The Arduino language is based on C/C++. After processing, Arduino codes is handed of to a C/C++ compiler (avr-g++).
http://blog.makezine.com/2013/04/15/developing-for-arduino-on-android/
Because Arduino uses Atmel's microprocessors, Atmels development environments AVR Studio and Atmel Studio may also be used for software development. Functions/methods:
Applications:
Building Research Equipment with Free, Open-Source Hardware: http://www.sciencemag.org/content/337/6100/1303.summary
http://www.diydrones.com/notes/ArduPilot
http://playground.arduino.cc/Projects/Ideas
http://www.instructables.com/id/Arduino-Projects/
Books:
Programming Arduino: Getting started with Sketches: http://www.amazon.com/Programming-Arduino-Getting-Started-Sketches/dp/0071784225/ref=sr_1_3?ie=UTF8&qid=1366760346&sr=8-3&keywords=Arduino
Arduino Cookbook: http://www.amazon.com/Arduino-Cookbook-Michael-Margolis/dp/1449313876/ref=sr_1_7?ie=UTF8&qid=1366760346&sr=8-7&keywords=Arduino
Practical Arduino: Cool projects for open source hardware: http://www.amazon.com/Practical-Arduino-Projects-Hardware-Technology/dp/1430224770/ref=tag_dpp_lp_edpp_ttl_in
http://www.amazon.com/30-Arduino-Projects-Evil-Genius/dp/007174133X/ref=pd_sim_pc_5
Accessories/Kits:
Sparkfun Inventors kit: http://www.amazon.com/Sparkfun-Inventors-professional-Arduino-retail/dp/B005FMNJ3S/ref=sr_1_14?ie=UTF8&qid=1366760346&sr=8-14&keywords=Arduino
Costs $100, free shipping.
Newsite Uno 3 starter kit: http://www.amazon.com/Starter-Kit-Newsite-Uno-Breadboard/dp/B0051QHPJM/ref=sr_1_2?ie=UTF8&qid=1366760346&sr=8-2&keywords=Arduino
Getting Started with Arduino Kit v3.0: http://www.makershed.com/Getting_Started_with_Arduino_Kit_V3_0_p/msgsa.htm
Costs $65
http://arduino.cc/en/Main/ArduinoStarterKit
http://store.arduino.cc/eu/index.php?main_page=product_info&cPath=2_23&products_id=185
Costs ~ 80€. ( + shipping + import duty)
Adafruit Budget Pack for Arduino (Arduino Uno R3) - Uno w/328: http://www.adafruit.com/products/193
Costs $50
Adafruit Starter Pack for Arduino (Includes Arduino Uno R3) - 1.0: http://www.adafruit.com/products/68
Costs $65
Raspberry Pi
http://en.wikipedia.org/wiki/Raspberry_Pi
http://www.itavisen.no/nyheter/raspberry-pi-er-helt-fantastisk-4976
Official downloads: http://www.raspberrypi.org/downloads
Unofficial wiki: http://elinux.org/RPi_Hub
Quick start guide: http://www.raspberrypi.org/wp-content/uploads/2012/12/quick-start-guide-v1.1.pdf
Official forum - basic setup and usage: http://www.raspberrypi.org/phpBB3/viewforum.php?f=26
Buying guide: http://elinux.org/RPi_Buying_Guide
FAQ: http://www.raspberrypi.org/faqs
Introducing the raspberry pi - getting started: http://www.h2g2.com/approved_entry/A9143796
Introducing the raspberry pi - peripherals you'll need: http://www.h2g2.com/approved_entry/A13413584
Raspberry Pi Stack exchange: http://raspberrypi.stackexchange.com/
The Pi Hut - accessories: http://thepihut.com/
"The true cost of Raspberry Pi - essential accessories": http://www.penguintutor.com/blog/viewblog.php?blog=6354
Gotcha's and new users tips: http://www.keyboardmaven.com/2013/04/raspberry-pi-gotchas-and-newbiebuyer.html
- Boots from SD card (Not included in price). Minimum size 2 GB. Minimum 4GB recommended. Pre-loaded SD cards can be bought. (for example: http://www.amazon.co.uk/For-Raspberry-preloaded-operating-partitioned/dp/B008IU78EK) If not, an SD card reader is needed to prepare the card. High-speed category 4 is recommended. See http://elinux.org/RPi_Easy_SD_Card_Setup and http://elinux.org/RPi_SD_cards
- Programs must be compilable for ARMv6 architecture. (Windows/x86 not supported)
- Video output through HDMI or Composite. No VGA.
- Power through micro USB port. Standard phone charger with micro USB plug can be used (minimum 700mA at 5 volts).
- No Real Time Clock (RTC) on board. Time is updated over internet after each boot.
- Not all peripherals (keyboards, mice, etc.) may work (may draw too much power). See http://elinux.org/RPi_VerifiedPeripherals
- Two models: A and B. B model draws 3.5 W, the A model 2 W.
- B model specifications: 700 Mhz ARM1, 256 MB SDRAM
http://elinux.org/RPi_Hardware_Basic_Setup#Prepared_Operating_System_SD_Card
http://www.theregister.co.uk/2013/03/14/feature_ten_raspberry_pi_projects/
Books:
Gray Girling: Rapsberry Pi Owners workshop manual: http://www.amazon.co.uk/Raspberry-Pi-Manual-practical-revolutionary/dp/0857332953
Mike McGrath: Raspberry Pi in easy steps: http://www.amazon.com/Raspberry-Easy-Steps-Mike-McGrath/dp/1840785810
Review of Raspberry pi books: http://www.theregister.co.uk/2013/04/18/feature_getting_into_the_raspberry_pi_books/
Richardson & Wallace. Getting Started with Raspberry Pi. Published December 2012: http://shop.oreilly.com/product/0636920023371.do
Upton & Halfacree: Raspberry Pi User Guide: http://www.amazon.com/Raspberry-User-Guide-Gareth-Halfacree /dp/111846446X Published September 2012. Somewhat dated already?
Tinkerforge
http://en.wikipedia.org/wiki/Tinkerforge
3D Printing
RepRap:
http://en.wikipedia.org/wiki/RepRap_Project
http://reprap.org/wiki/Main_Page
http://forums.reprap.org/list.php?1
http://vort.org/2012/11/20/why-doesnt-your-lab-have-3d-printer-yet/
http://forums.somethingawful.com/showthread.php?threadid=3365193
http://www.reprapcentral.com/vmchk.html
www.makerbot.com
http://www.reprap.org/wiki/Main_Page
www.3ders.org/
http://www.3ders.org/articles/20121123-meet-metalbot-new-all-metal-reprap-compatible-3d-printer.html
http://reprap.org/wiki/RepRap_Buyers%27_Guide
http://vort.org/2011/09/19/how-sequence-10000-metagenomes-3d-printer/
Software:
https://github.com/SolidCode/SolidPython#readme
Reviews
http://reviews.cnet.com/3d-printers/makerbot-replicator-3d-printer/4505-33809_7-35266602.html
Vendors
http://www.reprapdiscount.com/
http://www.makershed.com/default.asp