User:Jarle Pahr/Modelling: Difference between revisions

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=Openworm=
=Openworm=


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http://derkje-j.github.io/programming-life/
http://derkje-j.github.io/programming-life/
=Research groups=
http://covertlab.stanford.edu/


=Bibliography=
=Bibliography=

Revision as of 04:36, 4 July 2013

Openworm

http://www.openworm.org/

http://www.youtube.com/watch?v=DIb_Z7QkmIA

Software

COBRA Toolbox


http://derkje-j.github.io/programming-life/

Research groups

http://covertlab.stanford.edu/


Bibliography

Dynamic Modeling of Cellular Populations within iBioSim: http://pubs.acs.org/doi/abs/10.1021/sb300082b

Towards a whole-cell modeling approach for synthetic biology: http://www.scoop.it/t/synbiofromleukipposinstitute/p/4003384387/towards-a-whole-cell-modeling-approach-for-synthetic-biology?hash=bd5ab211-bd1a-46b6-af71-ca2e525b0fe1


A Whole-Cell Computational Model Predicts Phenotype from Genotype: http://www.cell.com/abstract/S0092-8674%2812%2900776-3


Books:

Biological Modeling and Simulation: A Survey of Practical Models, Algorithms, and Numerical Methods. http://mitpress.mit.edu/books/biological-modeling-and-simulation